DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and CG10804

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster


Alignment Length:579 Identity:198/579 - (34%)
Similarity:304/579 - (52%) Gaps:89/579 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KPSLLPMALESS------ELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            |..|:.:|..|:      |...:.:.|::|.|.:.||::.|..:||||||||||:.|.:||||||
  Fly    92 KAELVAIATASADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAF 156

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMAL 153
            |:||.::|.:.|.||:|:|:.:||...:|.:.|: ..:|.:.|:|.:..:...::|.||.:::|.
  Fly   157 LVPYFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNTIIAW 221

  Fly   154 TLRYFFDSFASELPWSFCREEWGDGCVSASGGQPLQGQLSRNF----------SSSTQLYLQRIV 208
            .|.|...||.|.|||:.|                 ..:|.:||          ||.||.|..|..
  Fly   222 CLIYLLHSFESPLPWADC-----------------PTRLYKNFTYDHEPECVASSPTQFYWYRTT 269

  Fly   209 LNETDSLE--EGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRAL 271
            |..::|::  |...|   .:|:.|.:||..|.:.:::|:.||||..|:.|:|||||:.|...|.:
  Fly   270 LQCSESVDMPENFNY---HMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGI 331

  Fly   272 TLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVT 336
            ||.||.|||.:..||:||.||:|.||..|.||:||||.:.||.:|.:||||...:|.||||.:|:
  Fly   332 TLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRDAILVS 396

  Fly   337 TLDTFTSLLSGVIIFGILG--------------------NLAHESGTKDIASVV---KAGPGLAF 378
            ..:..||:.:||::|.::|                    |..|.....|:.:.:   .:|.||||
  Fly   397 LTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPVCDLQTELANSASGTGLAF 461

  Fly   379 ISYPDAIAKFKMFP--QVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQ--FVNVKLWIIVVSLS 439
            |.:.:||   ..||  |::::|||.|||.||:.|..|.:..::|.|.|.  |.|:....||.:|.
  Fly   462 IIFTEAI---NQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMKLFPNLPKEYIVGALC 523

  Fly   440 VIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSN 504
            .....:.:.:....|.:|..|||.....|..|:.|:||.:::.:|||.:|...|.|.|...:.:.
  Fly   524 FSCCTISMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSISYIYGVRRFSDDIEMMTGSRPNF 588

  Fly   505 YYRICWSIVTPLVMLVILV---YSLLTMRPLSY----------NGQEFPLVYRVVGWCV 550
            |:..||..::|..|:.||:   |.||| ...||          .|.|:|      .||:
  Fly   589 YWMFCWKYLSPCAMVTILLASFYQLLT-EGSSYPAWIGSKGATEGMEWP------HWCI 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 182/516 (35%)
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 192/551 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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