DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a18

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_058859.2 Gene:Slc6a18 / 29323 RGDID:69352 Length:615 Species:Rattus norvegicus


Alignment Length:631 Identity:191/631 - (30%)
Similarity:297/631 - (47%) Gaps:125/631 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |..|.:.|::|:|||..:|||||:||||:....:|||||||||.:.|...|.|::|:|:.:||..
  Rat    17 RPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRL 81

  Fly   116 SRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGDGC 179
            .||.:.|: ..:|.:.|||........:::.||.:::...|.:|.:||...||||.|        
  Rat    82 RRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTILLWVLWFFLNSFQHPLPWSTC-------- 138

  Fly   180 VSASGGQPLQ----GQLSRNFSSSTQLYL-QRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTL 239
                   ||.    |.:....||.|..|. .|..||.|..: ...|.....|.|.|...|.||.|
  Rat   139 -------PLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDI-SNTGTIQWKLFLCLVACWTTVYL 195

  Fly   240 IIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQV 304
            .:|||::|:||..|..|||||:|:.|.|:|.||||||.:|:.|..||..:.|..|:||.:|.||:
  Rat   196 CVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMKILQNPRVWLDAATQI 260

  Fly   305 FFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILG-NLAHESG---TKD 365
            ||||::.||..|.::|||:..:|..:||..:..:::.|||.:.:.||.|:| ..:::.|   .::
  Rat   261 FFSLSLAFGGHIAFASYNQPRNNCEKDAVTIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRN 325

  Fly   366 IASVVK-----------------------------------------------AGPGLAFISYPD 383
            |.|::.                                               :|||||||.:.:
  Rat   326 ILSLINEFDFPELSISRDEYPSVLMYLNATQPERVARLPLKTCHLEDFLDKSASGPGLAFIVFTE 390

  Fly   384 AIAKFKMFP--QVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFV---NVKLWIIVVSLSVIGF 443
            |:..   .|  .|:|:|||.|||.||:.|..|.:..::|.|.|..:   .|....:...:..|.|
  Rat   391 AVLH---MPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLFDMGILPKGVPKETMTGVVCFICF 452

  Fly   444 LVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRI 508
            |..:.:....|.:.:.:.|....:...::.|..|::.|..:||.||.|.|.|:|...:.|.|:::
  Rat   453 LSAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRFCDDIEWMTGRRPSLYWQV 517

  Fly   509 CWSIVTPLVML-VILVY-SLLTMRPLSYNG-----QEFP----LVYRVVGW----C--------- 549
            .|.:|:|:::. :.|.| .||.....||..     :.||    .:|  .||    |         
  Rat   518 TWRVVSPMLLFGIFLSYIVLLAQSSPSYKAWNPQYEHFPSREEKLY--PGWVQVTCVLLSFLPSL 580

  Fly   550 -VSGCIIGQLFY-----WAGYANFKQPKGSLKSRINNSIKPHSDWG 589
             |.|..:.||.:     |.            .:.:.:::||....|
  Rat   581 WVPGIALAQLLFQYRQRWK------------NTHLESALKPQESRG 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 172/537 (32%)
Slc6a18NP_058859.2 SLC6sbd_B0AT3 16..591 CDD:212086 186/594 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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