DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a16

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_038949993.1 Gene:Slc6a16 / 292902 RGDID:1561338 Length:850 Species:Rattus norvegicus


Alignment Length:605 Identity:156/605 - (25%)
Similarity:267/605 - (44%) Gaps:117/605 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KPSLLPMALESS-------ELSPDRKARDN-------WGSSLEFLMSCIALSVGLGNVWRFPFTA 81
            |||....::|::       ||:...|...|       |.|..|::::.:...|....:.||....
  Rat   198 KPSTTEYSMETTPKQESPIELNKTSKENSNVFPPWLLWSSKAEYILALMGYLVMPSGLLRFVTCW 262

  Fly    82 LENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLAT 145
            :..|..:|.|.||::||.:|.|:.::||.:||.:.:..:.:: ..:|...|:||:.::...:..|
  Rat   263 VHKGSWSFFIAYLLMLFGLGIPLLFLEMAVGQRAQQSSIDLWKTLSPWFGGLGYSMVMVCLITNT 327

  Fly   146 YYASVMALTLRYFFDSFASELPWSFCREEWGDGCVSASGGQPLQGQLSRNF------SSSTQLYL 204
            |.....:..|.|....|...:||..|               ||| :.|.:|      ::|...:.
  Rat   328 YLNVFNSWILFYMSHIFHFVVPWDRC---------------PLQ-KNSSDFDPECEQATSYTYFW 376

  Fly   205 QRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVR 269
            .|..|..:||:|:| |.||.:||:.|.::|..:.:.::.|:||.||...||...||.::...|||
  Rat   377 YRQTLKASDSIEDG-GQPSFNLAMFLFLAWCLICVFMVNGIKSLGKVLCVLLQVPYFIIICFLVR 440

  Fly   270 ALTL-PGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDAN 333
            .|:: .|...|:.|.|..:..::.:..:|..|..||.|.:.:.||.:|..||:....:|..:||.
  Rat   441 TLSMGNGIGYGLNYLLILEVARISDLTMWCQAGIQVLFDIGLGFGPVISLSSHMSDFNNCLKDAF 505

  Fly   334 IVTTLDTFTSLLSGVIIFGILGNLA-----H--ESGTKDIASVVKAG--------PGL------- 376
            ::......|.|::......|||..|     |  :..|..:..::..|        |.|       
  Rat   506 LMGLFKIVTLLITTPFFLSILGFWATITTHHCCKKNTNKLLMLIAQGILPPEVEPPDLNDDPISI 570

  Fly   377 --------------AFIS-YPDA-IAK------------FKMFPQVFSL---------LFFAMLF 404
                          |.:| .|:. |.|            |.:|.:|.||         |||..|.
  Rat   571 YNSWLNSLPPPLRSAVLSMVPECNIQKQFMRIEDSPRFLFLIFTEVISLLPGSAFWTVLFFLALL 635

  Fly   405 MLGVGSN-VGMVSCIMTVLKDQFVNVKLW--IIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGV 466
            .||:.:| :.|:..|:| |:|.|...:..  ::.|.:|:..||.|||:|.|.|.:..:|:..:.|
  Rat   636 GLGLCTNLMYMLGNILT-LQDTFPFCRRQPRLLTVGVSMTTFLCGLIFIQPSGIYYFSLLSEYWV 699

  Fly   467 TFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRIC---WSIVTPLVMLVILVYSLLT 528
            ....:...:.|.:||.|.||.||...|   |:.:.:...:..|   |..|:|:|:|.:|::..:.
  Rat   700 AVPIITIILCETLAVAWAYGAKRFLAD---MMALLSRPIFPGCSWLWRYVSPVVLLGLLLFICIY 761

  Fly   529 MRPLSYNGQEFPLVYRVVGW 548
            :       .:.||||  :.|
  Rat   762 L-------VQGPLVY--MAW 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 144/553 (26%)
Slc6a16XP_038949993.1 SLC6sbd_NTT5 232..802 CDD:271392 148/571 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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