DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a1

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_848818.1 Gene:Slc6a1 / 232333 MGIID:95627 Length:599 Species:Mus musculus


Alignment Length:599 Identity:205/599 - (34%)
Similarity:341/599 - (56%) Gaps:32/599 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VSGGLPKLETSRCAGSGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNV 74
            |:.|....|.|....:.:   ||..|.:.::..  :.|...||.|....:|||||:..::|||||
Mouse     8 VADGQISTEVSEAPVASD---KPKTLVVKVQKK--AGDLPDRDTWKGRFDFLMSCVGYAIGLGNV 67

  Fly    75 WRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLA 139
            ||||:...:||||||||||.:.|...|.|::.:|..|||::|.|.:.|:..||:.:|||.|..:.
Mouse    68 WRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVL 132

  Fly   140 LGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DGCVSASGGQPLQGQLSRNFSSSTQLY 203
            ...|..||..:::..:.|.::||.:.|||..|...|. |.|.|   ...|..  :.|.:|:...:
Mouse   133 SFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFS---NYSLVN--TTNMTSAVVEF 192

  Fly   204 LQRIVLNETDSLEE--GIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFIL 266
            .:|.:...||.|::  .|.:|   ||:.|.|:|:.|...|.:||..:||..|..|.:||:::.||
Mouse   193 WERNMHQMTDGLDKPGQIRWP---LAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYIMLIIL 254

  Fly   267 LVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRD 331
            ..|.:|||||.:|:::::||.:.||.:.:||.:|.||:|||..:..|.:|...|||.|.:|||||
Mouse   255 FFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNSFHNNVYRD 319

  Fly   332 ANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFS 396
            :.||..:::.||:.:|.:||.|:|.:||.: .:.||.|..:||||||::||:|:.:..:.| :::
Mouse   320 SIIVCCINSCTSMFAGFVIFSIVGFMAHVT-KRSIADVAASGPGLAFLAYPEAVTQLPISP-LWA 382

  Fly   397 LLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV---KLWIIVVSLSVIGFLVGLIYITPGGQHII 458
            :|||:||.|||:.|....|...:|.|.|::..:   :..:.:.::.::.:|:||..||.||.::.
Mouse   383 ILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELFIAAVCIVSYLIGLSNITQGGIYVF 447

  Fly   459 TLMDFHGVTFVSLVSAI-FELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVIL 522
            .|.|::..:.:||:..: ||.:::.|.||..|...:.:.|:..:...::::|||..||:::..:.
Mouse   448 KLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVF 512

  Fly   523 VYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYA--NFKQPKGSLKSRINNSIKPH 585
            ::|.:.|.||:.....||...:.|||.::   :..:....||.  .|...|||||.|:...|:|.
Mouse   513 LFSAVQMTPLTMGSYVFPKWGQGVGWLMA---LSSMVLIPGYMAYMFLTLKGSLKQRLQVMIQPS 574

  Fly   586 SDW-----GPSDPK 594
            .|.     ||..|:
Mouse   575 EDIVRPENGPEQPQ 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 172/480 (36%)
Slc6a1NP_848818.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/14 (29%)
SLC6sbd_GAT1 2..599 CDD:212075 205/599 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 3/12 (25%)
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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