DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a20b

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus


Alignment Length:554 Identity:171/554 - (30%)
Similarity:276/554 - (49%) Gaps:81/554 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVV 100
            |.:.|.:......|.|..|.:.|:||:.||:.:||||||||||:.....|||:||:||:::|.|.
Mouse    33 PRSTECAHPGVVEKVRPKWDNPLQFLLVCISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVE 97

  Fly   101 GKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFAS 164
            |.|:.|:|:.:||...:|.:..: ..:|.:.|||.|.|:...:.:.|:..:....|.|.|.||..
Mouse    98 GMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGIASLVVSFLASVYFNVINTWALWYLFHSFQD 162

  Fly   165 ELPWSFC-----REEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSG 224
            .||||.|     ...:.:.|..|               ||||.:..|..||.:.|::|. |....
Mouse   163 PLPWSVCPLNSNHTGYDEECEKA---------------SSTQYFWYRKTLNISPSIQEN-GGVQW 211

  Fly   225 SLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE 289
            ..||.|.::||.|.|.|:||.:|:||..|.....||.|:.|.|||.|||.||.:|:.|..||:.|
Mouse   212 EPALCLTLAWLMVYLCILRGTESTGKVVYFTTSLPYFVLIIYLVRGLTLHGATNGLAYMFTPKIE 276

  Fly   290 KLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGIL 354
            :|..|:.|.||.||:||||.:..|.:|.::|||...::..:.|.||:.:::.|::.|.::.|.|.
Mouse   277 QLANPKAWINAATQIFFSLGLGCGGLIAFASYNEPSNDCQKHALIVSVINSTTAIFSSIVTFSIY 341

  Fly   355 GNLAH--------------------ESGTKDIASVVKA--------------------------- 372
            |..|.                    |.|...::::.:.                           
Mouse   342 GFKATFNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHIRNCSLESE 406

  Fly   373 ------GPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVKL 431
                  |.|||||.|.:||...:: .|::|:|:|.||..||:||.||..:.|:|.|.|..: :..
Mouse   407 LDTAVQGTGLAFIVYTEAIKNMEV-SQLWSVLYFFMLLTLGMGSMVGTGTAILTPLTDSKI-ISS 469

  Fly   432 WIIVVSLS----VIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQ 492
            ::...::|    ::...:|:::....|.:...|.:.:..|...|:..:.|.|||.::||.||...
Mouse   470 YLPKEAISGLVCLLNCAIGMVFTMEAGNYWFDLFNDYTATLSLLLIVLVETIAVCYVYGLKRFES 534

  Fly   493 DAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSL 526
            |...|.....|.|:::.|:.|:||:::.:.::.|
Mouse   535 DLRAMTGRTLSWYWKVMWAFVSPLLIVGLFIFYL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 166/536 (31%)
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 1/4 (25%)
SLC5-6-like_sbd 45..620 CDD:294310 169/542 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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