DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a2

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:600 Identity:215/600 - (35%)
Similarity:333/600 - (55%) Gaps:41/600 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GG---LPKLETSRCAGSGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGN 73
            ||   ||:.....|..:...::|.......|.:|:.| |.:.|:.||..::||:|.:..:|.|.|
Mouse    15 GGADPLPEQPLRPCKTADLLVVKERNGVQCLLASQDS-DAQPRETWGKKIDFLLSVVGFAVDLAN 78

  Fly    74 VWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLL 138
            |||||:...:||||||||||.:.|.:.|.|::|||:.|||::..|...|:...|..:|||||.:|
Mouse    79 VWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREGAATVWKICPFFKGVGYAVIL 143

  Fly   139 ALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGD-GC-----VSASGGQPLQGQLSR--- 194
            ....:..||..::|.:|.|.|.||...|||:.|...|.. .|     ::||    :.|..::   
Mouse   144 IALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCGHSWNSPNCTDPKLLNAS----VLGDHTKYSK 204

  Fly   195 -NFSSSTQLYLQRIV-LNETDSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLAL 257
             .|:.:.:.|.:.:: |:|:..:.: ||.|...|.|.|.:..:.:...:.:|||:|||..::.|.
Mouse   205 YKFTPAAEFYERGVLHLHESSGIHD-IGLPQWQLLLCLMVVIVVLYFSLWKGVKTSGKVVWITAT 268

  Fly   258 FPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYN 322
            .||.|:|:|||..:|||||.:|:..:|...:.:|.|..||.:|.||:||||...|||:|.::|||
Mouse   269 LPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYN 333

  Fly   323 RFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAK 387
            :|.:|.||||.:.:|::..||.:||..||.|||.:|||... :|..|...|.||.||.||:||:.
Mouse   334 KFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAHEHKV-NIEDVATEGAGLVFILYPEAIST 397

  Fly   388 FKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFV----NVKLWIIVVSLSVIGFLVGLI 448
            .. ....:::|||.||..||:.|::|.:..::|.|.|.|.    :.||:..||::|.  ||:.|.
Mouse   398 LS-GSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADDFQVLKRHRKLFTCVVTIST--FLLALF 459

  Fly   449 YITPGGQHIITLMDFHGVTFVSLVSAIF----ELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRIC 509
            .||.||.:::||:|    ||.:..|.:|    |.|.|.|.||..|...|.:.|:..|...|:|:|
Mouse   460 CITKGGIYVLTLLD----TFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFKPGLYWRLC 520

  Fly   510 WSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFK--QPKG 572
            |..|:|..:|.::|.|::..:||:|:...:|.....|||   |..:..:.....|..:|  ..:|
Mouse   521 WKFVSPAFLLFVVVVSIINFKPLTYDDYTYPPWANWVGW---GIALSSMILVPAYVIYKFLSIRG 582

  Fly   573 SLKSRINNSIKPHSD 587
            ||..|:...|.|.::
Mouse   583 SLWERVAYGITPENE 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 187/492 (38%)
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 2/5 (40%)
SLC5-6-like_sbd 56..615 CDD:382020 205/557 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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