DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and snf-10

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:697 Identity:149/697 - (21%)
Similarity:270/697 - (38%) Gaps:163/697 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LPKLETSRCAGSGEALLKPSLLPMALESSELSPDRKAR-DNWGSSLEFLMSCIALSVGLGNVWRF 77
            :|..:||..........| |:..:|||:..|  |.|.. ..|.|..|.:.:.::.....||:|.|
 Worm    42 IPIKKTSNATAISNIGFK-SVTNLALENIGL--DTKMEGPTWTSKWEAITATLSFVTCSGNIWFF 103

  Fly    78 PFTALENG--GGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFD-FAPLMRGVGYAQLLA 139
            |:..   |  ||.|...:......:..|:.|:|..|||::|...:.||. .||.|.|:. |.:..
 Worm   104 PYLC---GYYGGWFPYQFTFCYVFIAVPLLYLETALGQYASASPLSVFSRMAPAMAGLS-AGMCF 164

  Fly   140 LGVLATYYASVMA---LTL-RYFFDSFASELPWSFCRE-EWGDGCVS------ASGGQP------ 187
            :.|..|...||.|   ||: .:...|..|..||..|:| :.||.||:      .:..||      
 Worm   165 IMVFRTISLSVWAIYDLTIFTHASQSIWSTSPWESCQESQSGDYCVNYKLSSKCTWIQPGSDKEC 229

  Fly   188 --LQGQL--SRNFSSSTQ---------LYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTL 239
              .|..|  :|.|.....         :|.:.|.:|:.:.       ||.:..:.....|:.:.:
 Worm   230 DEYQEMLIATRGFQQRKSPFMSFVHGLMYKRSITMNDWEP-------PSVTSIICAVCLWIIIGI 287

  Fly   240 IIIRGVKSSGKAAYVLALFPYVVMFILLVRALTL---PGAYDGVMYFLTPQWEKLLEPQVWYNAV 301
            |.|.|.|..|:...|......|...:||...::|   ...:....|......:|.:....|.:|.
 Worm   288 ISIGGSKVLGRTGIVALTLLLVGTIMLLSYGMSLNDTTNVFTAFFYQSEGYEDKWMWVWSWADAA 352

  Fly   302 TQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDI 366
            .....:|.|..|.|..::|.|.|.:.::||..:::.:.....:.:|::.|..:..:..       
 Worm   353 AHALRALNVGCGGIQKFASLNNFHNKIHRDVLLISIVSFVFYICTGLLSFMFMAEIGR------- 410

  Fly   367 ASVVKAGPGLAFISYPDAIAKFK--------MFPQVFSLL--------FFAMLFML--------G 407
                        :.|||..|..:        |...|.|.:        .:..||.|        |
 Worm   411 ------------LYYPDLEASERIQLYATPVMIESVISEILTNSSMGSIWVFLFWLTLAACSIQG 463

  Fly   408 VGSNVGMVSCIMTVLKDQFVN---------VKLW----IIVVSLSVIGFLVGLIYITPGGQHIIT 459
            :.|.:.::|.::.    :.:|         :..|    ||:..:||.|.:..|.::..||.::::
 Worm   464 ISSYIWVISSMIV----ERLNGSRRKYGKALASWHKRAIILAIMSVTGLISSLPFLGNGGINLMS 524

  Fly   460 LMD---FHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKT--------SNYYRICWSIV 513
            .::   .:|..|::.|    |:|.|.::||.||      :.:||:.        :.::.:.|.::
 Worm   525 SIETFASYGTIFIAFV----EVITVSYVYGFKR------FSVNIRAMIGGHGPPNVFWWLNWLVI 579

  Fly   514 TPLVMLVILVYSLLTM-RPLSYNGQEFPLVYRVVGW--CVSGCIIGQLFYWAGYANFKQPKGSLK 575
            :|::::|.....:.|. :..::|  |..:|...:|:  .|..||...|::.         :....
 Worm   580 SPILLIVTFGCIVATFGQKKAFN--ENSIVSDPIGYSLLVMPCIFVILYFL---------RDEYD 633

  Fly   576 SRINNS-----IKPHSDWGPSDPKKLMDYQMFLRNKDEENSKNVNRR 617
            .|.|..     |:...||||.:|            :|..|:....|:
 Worm   634 RRKNMEPFVVMIRATGDWGPMNP------------EDRRNAVKFERQ 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 118/557 (21%)
snf-10NP_505682.2 SNF 78..628 CDD:264495 127/595 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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