DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and snf-6

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:589 Identity:168/589 - (28%)
Similarity:302/589 - (51%) Gaps:48/589 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPI 104
            |.:.:..:.:.|.||.:..::|::.|..:.|:|:.|:|||...::||.|||:|||.:|.:...|:
 Worm    53 EITGVGDENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFQHGGAAFLVPYLCMLCLASLPM 117

  Fly   105 YYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWS 169
            ::|||:||||||...:.|:...||.:|:|:||:...|..|.::..:.|.||.|..:||:..:|||
 Worm   118 FFMEMVLGQFSSSAAISVWKVVPLFKGIGFAQVTISGFFAVFFNIISAWTLFYLINSFSFSIPWS 182

  Fly   170 FCREEW-GDGCVSASGGQ--PLQGQLSRNFS------SSTQLYLQRIVLNETDS----------- 214
            .|...| |:.|...:..|  .:.|.|..|.|      ||.:..:  |.|::..|           
 Worm   183 NCANSWSGENCTLGTRIQCKEMNGTLLVNGSCIVEHASSNETTV--IPLHDLGSIPSLKYFHNDV 245

  Fly   215 --LEEGIGYPSGSLALMLGI----SWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTL 273
              |.:|:. ..|:|...||:    .|:.|.|.:.:|||||||..||..:.|::::.:||.|.|||
 Worm   246 LMLSKGVD-DFGTLNWYLGLCVLACWIAVFLCLFQGVKSSGKVVYVAVIVPFIILTVLLTRLLTL 309

  Fly   274 PGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTL 338
            .|:...|.|||||:||.|::..||..|..|.|:|::.|.|.:...:||:||.:|:|:|..:|..:
 Worm   310 DGSLAAVFYFLTPKWEILMDLHVWGEAAVQAFYSVSCCSGGLFTIASYSRFHNNIYKDIWLVLIV 374

  Fly   339 DTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAML 403
            |...||:..::.|..:|...:|.........::.|..|.|:...:|:|...:.| :::.|||.|:
 Worm   375 DVIVSLVGCLLTFSAIGFTCYEFAISLDKFHIRDGFHLVFVFLAEALAGVSVAP-LYAGLFFIMI 438

  Fly   404 FMLGVGSNVGMVSCIMTVLKDQF---VNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHG 465
            .::...:.:.:|..|::.:.|::   :......::.::..:..|:.:.:....|...:.|:....
 Worm   439 LLVVHATQMFVVETIVSSICDEYPERLRRNRRHVLTTVCALFILLSIPFCLSSGLFWMELLTQFV 503

  Fly   466 VTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNY--YRICWSIVTPLVMLVILVYSLLT 528
            :|:..:|.|..|.:|:.|:||...:..:|::::......|  ::|.:..:.|:|.|.||.:..|.
 Worm   504 LTWPLVVIAFLECMAINWVYGVDNMLDNAKWIVGYWPPCYIFWKILFKFICPMVYLAILCFLWLD 568

  Fly   529 MRPLSYNGQEFPLVYRVVGWCVSGC------IIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSD 587
            ...:.|...:||....:..||::..      |:|   .|    .|...||::..:....:.|...
 Worm   569 WNSIQYESYQFPYWSILTAWCIASFPLILIPIVG---IW----QFCIAKGTITQKWWRVLYPDDA 626

  Fly   588 WGPS 591
            |||:
 Worm   627 WGPA 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 150/504 (30%)
snf-6NP_001367976.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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