DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and dat-1

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_499043.1 Gene:dat-1 / 176304 WormBaseID:WBGene00000934 Length:615 Species:Caenorhabditis elegans


Alignment Length:593 Identity:192/593 - (32%)
Similarity:310/593 - (52%) Gaps:66/593 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEML 110
            |...||:.|...|:||:|.:..:|.|||:||||:...:||||.|||||.:::.:.|.|::|||:.
 Worm    35 PKDPAREQWSGKLDFLLSVVGFAVDLGNIWRFPYLCFKNGGGVFLIPYSIMVLLTGVPLFYMELC 99

  Fly   111 LGQFSSRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREE 174
            |||:..:|.:..:. ..||.:|:||..:|....:..:|..::|..|.|.:.||:..|||:.|...
 Worm   100 LGQYYRKGAITTWGRICPLFKGIGYCVILTAFYVDFFYNVILAWGLHYLYTSFSFNLPWASCNNS 164

  Fly   175 WG-----------DG---CVSASGGQPLQGQLSRNFSSSTQLYLQ-------------RIVLNET 212
            :.           ||   |.||:     |...:...|::.:.:.:             .::.:.|
 Worm   165 YNSPACYEPHWSEDGTAMCRSAN-----QSVSAEKISAAEEYFYKGFLGLHEANAPNSHVIRSVT 224

  Fly   213 DSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAY 277
            |     :|.....:||.|.:.:|.....:.:|:.:|||..:..|||||||:.||.:|.:||||..
 Worm   225 D-----LGNVRWDIALSLFVVYLICYFSMWKGIHTSGKVVWFTALFPYVVLGILFIRGVTLPGWQ 284

  Fly   278 DGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFT 342
            :|:.|:|.|.:|.|..|.||.:|.|||||||...|||::.|||||.|.:|||.||...:.::..|
 Worm   285 NGIEYYLRPNFEMLKRPSVWQDAATQVFFSLGPGFGVLMAYSSYNDFHNNVYVDALFTSFINCAT 349

  Fly   343 SLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLG 407
            |.|||.:||.:||.::.:|| |.|.:|.:.||||.|:.||:|::.....| .:|:|||.||..||
 Worm   350 SFLSGFVIFSVLGYMSCKSG-KPIEAVAQEGPGLVFVVYPEALSTMPYAP-FWSVLFFLMLMTLG 412

  Fly   408 VGSNVGMVSCIMTVLKDQFVNVK--LWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVS 470
            :.|:.|....|:|.|.|:|..:|  ..:.|..|.....::|:...|.||..|:..:..:|.|:..
 Worm   413 LDSSFGGSEAIITGLSDEFPILKKNREVFVGCLFAFYMVIGIAMCTEGGILIMEWLIIYGTTWGL 477

  Fly   471 LVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN 535
            |::...|.:.:.:|||.::...|.:.|:..:..||::.|||...|.::|.::..:.:..:.|:|.
 Worm   478 LIAVFCEAMVIAYIYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTYQ 542

  Fly   536 GQEFPLVYRVVG--WCVSGCIIGQLFYWAGYANFKQPKGS------------LKSRINN------ 580
            ...:|....|:|  :.:||.....|   .|...|...:|:            .:.|.|.      
 Worm   543 DYTYPTAANVIGIIFALSGASFIPL---VGIYKFVNARGNTISEKWQRVTMPYRKRPNQTEYIPI 604

  Fly   581 -SIKPHSD 587
             :.:||||
 Worm   605 PTTQPHSD 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 172/503 (34%)
dat-1NP_499043.1 SLC6sbd_SERT-like_u1 40..591 CDD:271405 184/565 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.