DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and Slc6a9

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001342104.1 Gene:Slc6a9 / 14664 MGIID:95760 Length:652 Species:Mus musculus


Alignment Length:589 Identity:218/589 - (37%)
Similarity:346/589 - (58%) Gaps:52/589 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ALESSELSPDRK-ARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVG 101
            |:.|.....|:. .|.|||:.:||:::.:..:||||||||||:....||||||:.||.::|...|
Mouse    32 AVPSEATKKDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIFCG 96

  Fly   102 KPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASEL 166
            .|:::||:..|||:|:|.:.|:..:|:.:||||..::....:..||..|:.:...|||.|....|
Mouse    97 IPLFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVL 161

  Fly   167 PWSFCREEWGD----GCVSAS----GGQP--LQGQLSRNF------SSSTQLYLQRIVLNETDSL 215
            ||::|...|..    |.:.||    |.:|  |.|.||..|      :|.::.|.:..||    .|
Mouse   162 PWAYCNNPWNTPDCAGVLDASNLTNGSRPAALSGNLSHLFNYTLQRTSPSEEYWRLYVL----KL 222

  Fly   216 EEGIG-YPSGSLALM--LGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAY 277
            .:.|| :....|.|:  ||:||:.|.|.:|||||||||..|..|.|||||:.||.||.:||.||:
Mouse   223 SDDIGNFGEVRLPLLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAF 287

  Fly   278 DGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFT 342
            .|:||:|||||:|:||.:||.:|.:|:|:||...:|.:|..:|||:|.:|.|||:.|::..:..|
Mouse   288 TGIMYYLTPQWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCAT 352

  Fly   343 SLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLG 407
            |:.:|.:||.|||.:|:..|. |::.|...||||||::||:|:....:.| ::|||||.||.:||
Mouse   353 SVYAGFVIFSILGFMANHLGV-DVSRVADHGPGLAFVAYPEALTLLPISP-LWSLLFFFMLILLG 415

  Fly   408 VGSNVGMVSCIMTVLKDQFVNVKLWI------IVVSLSVIGFLVGLIYITPGGQHIITLMDFHGV 466
            :|:...::..::|.:.|:..|.  ||      :.:.::|.|||:|:...:..|.:.:.|||.:..
Mouse   416 LGTQFCLLETLVTAIVDEVGNE--WILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAA 478

  Fly   467 TFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRP 531
            :|..:|.:....:::.:|||.:...||.:.||......:::|||..|:|.::..||:::::..||
Mouse   479 SFSLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILIFTVIQYRP 543

  Fly   532 LSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAG------YANF---KQPKGSLKSRINNSIKPHSD 587
            ::||..::|      ||.|:   ||.|...:.      ||.|   :....:|..|:.|:.||..|
Mouse   544 ITYNHYQYP------GWAVA---IGFLMALSSVICIPLYALFQLCRTDGDTLLQRLKNATKPSRD 599

  Fly   588 WGPS 591
            |||:
Mouse   600 WGPA 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 191/498 (38%)
Slc6a9NP_001342104.1 SLC6sbd_GlyT1 30..613 CDD:212067 218/589 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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