DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a13

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001366036.1 Gene:Slc6a13 / 14412 MGIID:95629 Length:602 Species:Mus musculus


Alignment Length:580 Identity:205/580 - (35%)
Similarity:326/580 - (56%) Gaps:21/580 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SRCAG---SGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTA 81
            :|.:|   :||.  || :.| |:|..| ......|::|.:.:||::|.....:|||||||||:..
Mouse     3 NRASGTTSNGET--KP-VCP-AMEKVE-EDGTLEREHWNNKMEFVLSVAGEIIGLGNVWRFPYLC 62

  Fly    82 LENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLAT 145
            .:||||||.||||:.||..|.|::::|..|||::::|.:..: ...|:..|:|||..:.:.:|..
Mouse    63 YKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRRICPIFEGIGYASQMIVSLLNV 127

  Fly   146 YYASVMALTLRYFFDSFASELPWSFCREEWG-DGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVL 209
            ||..|:|..|.|.|.||.::|||..|..||. :.||............|.|.:|....:.:|.||
Mouse   128 YYIVVLAWALFYLFSSFTTDLPWGSCSHEWNTENCVEFQKANDSMNVTSENATSPVIEFWERRVL 192

  Fly   210 NETDSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLP 274
            ..:|.::. :|.....|.|.|.::|:.....|.:||||:||..|..|.|||:::.:||:|.:|||
Mouse   193 KLSDGIQH-LGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLP 256

  Fly   275 GAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLD 339
            ||..|:.::|.|...:|.:||||.:|.||:|||.|:|.|.:....|||::.:|.|||...:..|:
Mouse   257 GAAQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCIALCILN 321

  Fly   340 TFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLF 404
            :.||.::|..||.|||.::.|.|. .|:.|.::|||||||:||.|:......| :::..||.|:.
Mouse   322 SSTSFMAGFAIFSILGFMSQEQGV-PISEVAESGPGLAFIAYPRAVVMLPFSP-LWACCFFFMVV 384

  Fly   405 MLGVGSNVGMVSCIMTVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFH 464
            :||:.|....|..::|.|.|.:..|     :..::::.:|||.|.:|||.:|.||.::..|.|::
Mouse   385 LLGLDSQFVCVESLVTALVDMYPRVFRKKNRREVLILIVSVISFFIGLIMLTEGGMYVFQLFDYY 449

  Fly   465 GVTFVSLV-SAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLT 528
            ..:.:.|: .||||.:.|.|:||..|...:.|.|:..|.....:.||...||.|.|...::||:.
Mouse   450 AASGMCLLFVAIFESLCVAWVYGAGRFYDNIEDMIGYKPWPLIKYCWLFFTPAVCLATFLFSLIK 514

  Fly   529 MRPLSYNGQ-EFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSD 587
            ..||:||.: .:|.....:||.::...:..:..|:.| ..:..||.|:.|:...:.|..|
Mouse   515 YTPLTYNKKYTYPWWGDALGWLLALSSMICIPAWSIY-KLRTLKGPLRERLRQLVCPAED 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 177/481 (37%)
Slc6a13NP_001366036.1 SLC5-6-like_sbd 32..575 CDD:382020 195/546 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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