DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a3

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:585 Identity:200/585 - (34%)
Similarity:323/585 - (55%) Gaps:34/585 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            :...|:.|...|:.::.         |:.|...::||:|.|..:|.|.||||||:...:||||||
Mouse    43 TNSTLINPPQTPVEVQE---------RETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAF 98

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALT 154
            |:|||:.:.:.|.|::|||:.||||:..|...|:...|:::|||:..:|....:..:|..::|..
Mouse    99 LVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWA 163

  Fly   155 LRYFFDSFASELPWSFCREEWGD-GCVSASGGQPLQG-QLSRNFSSSTQL-YLQRIV--LNETDS 214
            |.|||.||..:|||..|...|.. .|..|.......| .|:..|.::... |.:|.|  |:::..
Mouse   164 LHYFFSSFTMDLPWIHCNNTWNSPNCSDAHSSNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRG 228

  Fly   215 LEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDG 279
            ::: :|.|...|...|.:..:.:...:.:|||:|||..::.|..||||:..||:|.:|||||.||
Mouse   229 IDD-LGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAMDG 292

  Fly   280 VMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSL 344
            :..:|:..:.:|.|..||.:|.|||.|||.|.|||:|.:||||:|.:|.||||.|.|::::.||.
Mouse   293 IRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSF 357

  Fly   345 LSGVIIFGILGNLA--HESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLG 407
            .||.::|..||.:|  |....:|:|:   .||||.||.||:|||...: ...::.:||.||..||
Mouse   358 SSGFVVFSFLGYMAQKHNVPIRDVAT---DGPGLIFIIYPEAIATLPL-SSAWAAVFFLMLLTLG 418

  Fly   408 VGSNVGMVSCIMTVLKDQFV----NVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTF 468
            :.|.:|.:..::|.|.|:|.    :.:|:.:.:.|:.  ||:.|..:|.||.::.||:|......
Mouse   419 IDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLAT--FLLSLFCVTNGGIYVFTLLDHFAAGT 481

  Fly   469 VSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLS 533
            ..|...:.|.|.|.|.||.::...|.:.|...:.:.|:|:||.:|:|..:|.::|.|::|.||..
Mouse   482 SILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPH 546

  Fly   534 YNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPKKLMD 598
            |....||.....:||.::...:..:..:|.| .|....||.:.::..:|.|..|      ::|:|
Mouse   547 YGAYIFPDWANALGWIIATSSMAMVPIYATY-KFCSLPGSFREKLAYAITPEKD------RQLVD 604

  Fly   599  598
            Mouse   605  604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 177/484 (37%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 197/559 (35%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 7/29 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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