DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a8

DIOPT Version :10

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_598748.1 Gene:Slc6a8 / 102857 MGIID:2147834 Length:640 Species:Mus musculus


Alignment Length:576 Identity:198/576 - (34%)
Similarity:305/576 - (52%) Gaps:59/576 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |:.|...::|:|||:..:||||||||||:...:||||.|||||:::..|.|.||:::|:.||||.
Mouse    52 RETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFM 116

  Fly   116 SRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG---- 176
            ..|.:.|::..||.:|:|||.::.:....|||..|:|....|...||.:.|||:.|...|.    
Mouse   117 KAGSINVWNICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDC 181

  Fly   177 ------DGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSG---SLALMLGI 232
                  :.|.:||.......||:...|...:.:..:::     .|..|:..|..   .:.|.|..
Mouse   182 VEIFRHEDCANASLANLTCDQLADRRSPVIEFWENKVL-----RLSTGLEVPGALNWEVTLCLLA 241

  Fly   233 SWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVW 297
            .|:.|...:.:||||:||..|..|.|||||:.:||||.:.||||.||::|:|.|.|.||..||||
Mouse   242 CWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLKPDWSKLGSPQVW 306

  Fly   298 YNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESG 362
            .:|.||:|||.|:..|.:....|||||.:|.|:||.|:..:::.||..:|.::|.|||.:|.|.|
Mouse   307 IDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSGTSFFAGFVVFSILGFMATEQG 371

  Fly   363 TKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKD--- 424
            . .|:.|.::|||||||:||.|:....:.| :::.|||.||.:||:.|....|...:|.|.|   
Mouse   372 V-HISKVAESGPGLAFIAYPRAVTLMPVAP-LWAALFFFMLLLLGLDSQFVGVEGFITGLLDLLP 434

  Fly   425 --QFVNVKLWIIVVSLSVIGFLVGLIYIT-----PGGQHIITLMDFHGVTFVSLV-SAIFELIAV 481
              .:...:..|.|.....:.|::.|..:|     .||.::..|.|::..:..:|: .|.:|.:.|
Mouse   435 ASYYFRFQREISVALCCALCFVIDLSMVTDVSGGKGGMYVFQLFDYYSASGTTLLWQAFWECVVV 499

  Fly   482 GWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNG-QEFPLVYRV 545
            .|:||..|...|...|:..:...:.:.|||..||||.:.|.:::::...||.||. ..:|.....
Mouse   500 AWVYGADRFMDDIACMIGYRPCPWMKWCWSFFTPLVCMGIFIFNIVYYEPLVYNNTYVYPWWGEA 564

  Fly   546 VGW--------CVS----GCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWG 589
            :||        ||.    ||::             :.||::..|..:..:|  .||
Mouse   565 MGWAFALSSMLCVPLHLLGCLL-------------RAKGTMAERWQHLTQP--IWG 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 180/497 (36%)
Slc6a8NP_598748.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SLC6sbd_CT1 52..626 CDD:271397 198/576 (34%)
Blue background indicates that the domain is not in the aligned region.

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