DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a8

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_598748.1 Gene:Slc6a8 / 102857 MGIID:2147834 Length:640 Species:Mus musculus


Alignment Length:576 Identity:198/576 - (34%)
Similarity:305/576 - (52%) Gaps:59/576 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |:.|...::|:|||:..:||||||||||:...:||||.|||||:::..|.|.||:::|:.||||.
Mouse    52 RETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLIALVGGIPIFFLEISLGQFM 116

  Fly   116 SRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG---- 176
            ..|.:.|::..||.:|:|||.::.:....|||..|:|....|...||.:.|||:.|...|.    
Mouse   117 KAGSINVWNICPLFKGLGYASMVIVFYCNTYYIMVLAWGFYYLVKSFTTTLPWATCGHTWNTPDC 181

  Fly   177 ------DGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSG---SLALMLGI 232
                  :.|.:||.......||:...|...:.:..:::     .|..|:..|..   .:.|.|..
Mouse   182 VEIFRHEDCANASLANLTCDQLADRRSPVIEFWENKVL-----RLSTGLEVPGALNWEVTLCLLA 241

  Fly   233 SWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVW 297
            .|:.|...:.:||||:||..|..|.|||||:.:||||.:.||||.||::|:|.|.|.||..||||
Mouse   242 CWVLVYFCVWKGVKSTGKIVYFTATFPYVVLVVLLVRGVLLPGALDGIIYYLKPDWSKLGSPQVW 306

  Fly   298 YNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESG 362
            .:|.||:|||.|:..|.:....|||||.:|.|:||.|:..:::.||..:|.::|.|||.:|.|.|
Mouse   307 IDAGTQIFFSYAIGLGALTALGSYNRFNNNCYKDAIILALINSGTSFFAGFVVFSILGFMATEQG 371

  Fly   363 TKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKD--- 424
            . .|:.|.::|||||||:||.|:....:.| :::.|||.||.:||:.|....|...:|.|.|   
Mouse   372 V-HISKVAESGPGLAFIAYPRAVTLMPVAP-LWAALFFFMLLLLGLDSQFVGVEGFITGLLDLLP 434

  Fly   425 --QFVNVKLWIIVVSLSVIGFLVGLIYIT-----PGGQHIITLMDFHGVTFVSLV-SAIFELIAV 481
              .:...:..|.|.....:.|::.|..:|     .||.::..|.|::..:..:|: .|.:|.:.|
Mouse   435 ASYYFRFQREISVALCCALCFVIDLSMVTDVSGGKGGMYVFQLFDYYSASGTTLLWQAFWECVVV 499

  Fly   482 GWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNG-QEFPLVYRV 545
            .|:||..|...|...|:..:...:.:.|||..||||.:.|.:::::...||.||. ..:|.....
Mouse   500 AWVYGADRFMDDIACMIGYRPCPWMKWCWSFFTPLVCMGIFIFNIVYYEPLVYNNTYVYPWWGEA 564

  Fly   546 VGW--------CVS----GCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWG 589
            :||        ||.    ||::             :.||::..|..:..:|  .||
Mouse   565 MGWAFALSSMLCVPLHLLGCLL-------------RAKGTMAERWQHLTQP--IWG 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 180/497 (36%)
Slc6a8NP_598748.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
SLC6sbd_CT1 52..626 CDD:271397 198/576 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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