DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a20a

DIOPT Version :10

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:199 Identity:38/199 - (19%)
Similarity:74/199 - (37%) Gaps:64/199 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IKKRAKRNTLSS-------LPQETQPLRKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREI 74
            :|..||..::|:       ||....|.|              :::|:...||.:..:        
Mouse   127 VKDCAKMKSVSAVSGSAVLLPCSEHPQR--------------NTTDKVTWKVIEGHR-------- 169

  Fly    75 NFPSMEVSEQPSESSSQDSTKTDGKIAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTWL 139
               |.::::..|.|::.:||:   |::          .|:..|.::....:..|||.:|....|.
Mouse   170 ---STDITQYRSSSTTSNSTE---KLS----------NPLFERAKQLENGSLVIRDSVKADDLWY 218

  Fly   140 GTFDTLEEAAKAYDAKKLEFDAIVAGNVSTTKRDVSSSETSQCSRSSPVVPVEQD----DTSASA 200
                    ..:..|....|...::.|.       |::..|:..:..:|.:|..|.    ||:|:.
Mouse   219 --------RCRVNDTTCYEVKLVIKGL-------VTAKSTTLFTTVTPKIPAGQSRGNTDTTANN 268

  Fly   201 LTCV 204
            ||.|
Mouse   269 LTAV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 30/157 (19%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:444915 38/199 (19%)

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