DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and LOC100497766

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_031757157.1 Gene:LOC100497766 / 100497766 -ID:- Length:618 Species:Xenopus tropicalis


Alignment Length:570 Identity:203/570 - (35%)
Similarity:316/570 - (55%) Gaps:51/570 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SPDRKA--RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYM 107
            |.|:|.  |.:|.:.:||::|.....:|||||||||:...:||||||||||:|.....|.|::::
 Frog    30 SNDKKVNERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFIFCGIPVFFL 94

  Fly   108 EMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFC 171
            |..||||:|.|.:..: ...||..|:|||..:....|..||..::|..:.|.|:.|::||||:.|
 Frog    95 ETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLFNCFSAELPWATC 159

  Fly   172 REEWG-DGCVSASGGQPLQGQLSRNFSSSTQL-----------YLQRIVLNETDSLEEGIGYPSG 224
            ..:|. |.||..   |.|      |.|:::|:           :.:|.||..:|.:|. ||....
 Frog   160 GHKWNTDKCVEF---QKL------NMSNASQISFVNATSPVMEFWERRVLAISDGIEH-IGELRW 214

  Fly   225 SLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE 289
            .|||.|..:|......|.:|.||:||..||.|.||||::.|||:|.:|||||..|:.::|.|...
 Frog   215 ELALCLLGAWTVCYFCIWKGTKSTGKVVYVTATFPYVMLLILLIRGVTLPGASQGIKFYLYPDLS 279

  Fly   290 KLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGIL 354
            :|.:||||.:|.||:|||.|:|.|.:....|||.:.:|.|||..::..|::.||.::|..||.:|
 Frog   280 RLSDPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVL 344

  Fly   355 GNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIM 419
            |.:|:|.|. .||.|.::|||||||:||.|:....:.| :::.|||.||..||:.|....|..::
 Frog   345 GFMAYEQGV-PIAEVAESGPGLAFIAYPRAVTMMPLAP-LWAALFFMMLIFLGLDSQFVCVESLV 407

  Fly   420 TVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFEL 478
            |.:.|.:..:     :..:::::||::.:|:|||.:|.||.::..|.|.:..:.:.|: .|:||.
 Frog   408 TAVVDMYPKIFRRGYRRELLILALSIVSYLLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAVFEC 472

  Fly   479 IAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNG-QEFPLV 542
            :.:||:||:.|...:.|.|:..:.....:.||...||.:...|.::.|:..:||.||. ..:|..
 Frog   473 VCIGWVYGSNRFYDNIEDMIGHRPFVLIKWCWMFFTPGICASIFIFFLVKYKPLKYNNVYTYPAW 537

  Fly   543 YRVVGW--------CVSGCIIGQLFYWAGYANFKQ-------PKGSLKSR 577
            ...:||        |:...||.::....|  :|.|       |...||.|
 Frog   538 GYGIGWMMALSSMVCIPLWIIIKMCQTEG--SFIQKLKTLTLPSPELKMR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 181/492 (37%)
LOC100497766XP_031757157.1 SLC5-6-like_sbd 37..578 CDD:382020 196/554 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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