DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a4l

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_012825214.2 Gene:slc6a4l / 100496361 XenbaseID:XB-GENE-981144 Length:590 Species:Xenopus tropicalis


Alignment Length:581 Identity:204/581 - (35%)
Similarity:321/581 - (55%) Gaps:41/581 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFV 99
            ||:..::.       :||.|...::||:|.|..:|.||||||||:...:||||||||||.::...
 Frog    28 LPLITQAD-------SRDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIF 85

  Fly   100 VGKPIYYMEMLLGQFSSRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFA 163
            .|.|::|||:.||||...|.:.::. ..|:.:|:|:|..:....::.||.:::|..|.||:.||.
 Frog    86 GGVPLFYMELALGQFHRMGAIPIWKRICPIFKGIGFAICIIALYVSFYYNTIIAWALFYFYSSFT 150

  Fly   164 SELPWSFCREEWG-DGCVSASGGQPLQGQLSRNFSSS--TQLYLQRIV-LNETDSLEEGIGYPSG 224
            ..|||:.|...|. ..|.:..|...:..   .|:|.|  .:.|.:::: ::|.:.| :.:|....
 Frog   151 ETLPWTNCDNPWNTPNCTNYFGRSNITW---NNYSKSPAEEFYTRKVLGIHEAEGL-DNVGGLRW 211

  Fly   225 SLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE 289
            .|.|.|.|.:..|...:.:|||:|||..:|.|..||||:.|||:|..|||||:.|::::|.|:||
 Frog   212 QLILCLFIIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLLILLIRGATLPGAWRGILFYLRPKWE 276

  Fly   290 KLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGIL 354
            ||::..||.:|..|:||||...|||::..||||.|.:|.||||.|.:|::..||.:||.:||.:|
 Frog   277 KLMDTAVWVDAAAQIFFSLGPGFGVLLALSSYNPFHNNCYRDALITSTVNCLTSFVSGFVIFTVL 341

  Fly   355 GNLAHESGTKDIASVVK-AGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCI 418
            |.:|...|. ::..|.| .||.|.||:||:|||.. :....|:::||.|:..||:.|..|.:..|
 Frog   342 GYMAEMRGV-EVEDVAKDKGPSLLFITYPEAIANM-VGSTFFAIIFFLMMITLGLDSTFGGLEAI 404

  Fly   419 MTVLKDQFVNV---KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIA 480
            :|.:.|::.::   :..:.|:.|.::.|...|..:|.||.:::.|::..|.....:.....|.||
 Frog   405 ITAVMDEYPHILSKRRELFVLGLVIVCFTGSLSTLTYGGAYVVKLLEQFGAGCPIIAVVFLEAIA 469

  Fly   481 VGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRV 545
            |.|.||.:|...|.:.||......::||||..::|..:..|:|.||:...||.....::|     
 Frog   470 VSWFYGIQRFSNDVKSMLGFVPGIFWRICWVAISPAFLAFIIVSSLMDQPPLILFDYQYP----- 529

  Fly   546 VGWCVS-GCIIG-QLFYWAG-YANFK--QPKGSLKSRINNSIKPHSDWGPSDPKKLMDYQM 601
             .|.|| |.:|| ..|.|.. |..:|  ...||||.|:...::|.        |.:.|.|:
 Frog   530 -KWTVSVGFLIGASSFIWIPVYMVYKLVWTPGSLKERLAVCVRPE--------KTVRDQQL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 177/482 (37%)
slc6a4lXP_012825214.2 SLC5-6-like_sbd 37..573 CDD:382020 198/547 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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