DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a5

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_031756248.1 Gene:slc6a5 / 100495275 XenbaseID:XB-GENE-993852 Length:789 Species:Xenopus tropicalis


Alignment Length:647 Identity:226/647 - (34%)
Similarity:349/647 - (53%) Gaps:73/647 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GGLPKLETSRCAGSGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWR 76
            |.:|...|......|..    |:.|..|...|...:.|||.||.|.|:|::|.:..:||||||||
 Frog   148 GWVPSQSTVVLGTDGNT----SVFPGTLNGDEEGDENKARGNWSSKLDFILSMVGYAVGLGNVWR 208

  Fly    77 FPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALG 141
            ||:.|.:|||||||||||.:|.:.|.||:|||:.||||:|:|.:.|:...|.::|.|.|.|:...
 Frog   209 FPYLAFKNGGGAFLIPYLTMLALAGLPIFYMEVALGQFASQGPISVWKAIPALQGCGIAMLIISV 273

  Fly   142 VLATYYASVMALTLRYFFDSFASELPWSFCREEWG------------DGCVSASGGQP------- 187
            ::|.||..:|..|:.|.|.|..|.|||:.|...|.            |.|:  .|.||       
 Frog   274 LIAIYYNIIMCYTIFYLFASLVSVLPWASCTNPWNTPDCKDKDRLMLDSCI--IGSQPNIHIKNS 336

  Fly   188 --------------LQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPS---GSLALMLGISWL 235
                          .....:::|.|.::.|.:..:|    .:..||.||.   ..||:.|.::|.
 Frog   337 TFCMTAYPNLTLVNFTSHANKSFVSGSEEYFKYNML----KISAGIEYPGEIRWPLAICLFLAWT 397

  Fly   236 TVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNA 300
            .|...:.:|:|||||..|..|.|||||:.|||:|.:|||||.||:.:|:.|:||||::..||.:|
 Frog   398 IVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGDGIWWFIMPKWEKLMDAMVWKDA 462

  Fly   301 VTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKD 365
            .||:||||:..:|.:|..||||:|.:|||||..|||..::.||:.:|.:||.::|.:||.... |
 Frog   463 ATQIFFSLSAAWGGLITLSSYNKFHNNVYRDTLIVTCTNSATSIFAGFVIFSVIGFMAHILNV-D 526

  Fly   366 IASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV- 429
            |..|...|||:||:.||:|:.:..:.| .::::||.||..||:.:....:..|:|.:.|:|..: 
 Frog   527 IEKVADQGPGIAFVVYPEALTRLPLSP-FWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKLL 590

  Fly   430 ----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRL 490
                .|:.::..::.  |::|...||.||.:::.|:|.:..::..::.|||||:.:.::||.:|.
 Frog   591 RPHKPLFTLICCVAF--FIMGFPMITQGGIYMLQLVDNYAASYSLVIIAIFELVGISYVYGLQRF 653

  Fly   491 CQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCI- 554
            |:|.|.|:..:.|.::::||:.|||.::..||.:|.....|::|....:|....|:||.:..|. 
 Frog   654 CEDIEMMIGFQPSRFWKVCWAFVTPTILTFILCFSFYQWEPMTYGSYHYPTWSMVMGWLMLACSV 718

  Fly   555 --IGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPKKLMDYQMFLRNKDEENSKNV 614
              |..:|....|.    ..|:...|:.....|..||||           ||.....|..||:
 Frog   719 IWIPVMFVIKMYL----APGTFIERLKLVCSPQPDWGP-----------FLAKHRGERYKNM 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 192/514 (37%)
slc6a5XP_031756248.1 SLC6sbd_GlyT2 183..779 CDD:271389 216/608 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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