DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a6

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:586 Identity:199/586 - (33%)
Similarity:322/586 - (54%) Gaps:50/586 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LLKPS--LLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLI 91
            :||||  ..|......|.......|:.|.|.::|::|.....:|||||||||:...:||||||||
 Frog    17 ILKPSPGKSPGTRPEDEADGKPPQREKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLI 81

  Fly    92 PYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTL 155
            ||.:.||..|.|::::|::||||:|.|.:..:: ..|:..|:|||.::.:.:|..||..::|..:
 Frog    82 PYFIFLFGGGLPVFFLEVVLGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGV 146

  Fly   156 RYFFDSFASELPWSFCREEWG-DGCVS---ASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLE 216
            .|.|.||..:|||:.|.:.|. :.||.   ...........|.||:|....:.:..||:.:..::
 Frog   147 YYLFQSFQGQLPWALCHQPWNTESCVEDTFRKNWTMWMSMNSTNFTSPVTEFWEHKVLSLSKGID 211

  Fly   217 EGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVM 281
            : :|.....|||.|.::|:.....|.:||:|:||..|..|.||::::.:||:|.:|||||.:|:.
 Frog   212 D-VGVLKWDLALCLLLTWVICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPGAAEGIK 275

  Fly   282 YFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLS 346
            ::|.|...:|.:||||.:|.||:|||.|:|.|.:....|||::.:|.|||..::..|::.||.:|
 Frog   276 FYLYPDITRLADPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVS 340

  Fly   347 GVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSN 411
            |..||.:||.:|.|.|. |||.|.::|||||||:||.|::...: |..:::|||.||.:||:.|.
 Frog   341 GFAIFSVLGFMAQEQGV-DIADVAESGPGLAFIAYPKAVSMMPL-PSFWAILFFIMLLLLGLDSQ 403

  Fly   412 VGMVSCIMTVLKDQFVNV-------KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFV 469
            ...|...:|.|.|.:.:.       :::|.||..  :.:|:||..:|.||.::..|.|::..:.|
 Frog   404 FVEVEGQITSLVDLYPSFLRKGYRREIFIAVVCF--LSYLLGLTMVTEGGMYVFQLFDYYAASGV 466

  Fly   470 SLV-SAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLS 533
            .|: .|.||.:||.|:||..:...:.|.|:..|...:.:..|:::|||:.:...::||....||:
 Frog   467 CLLWVAFFECVAVAWVYGADKFYDNIEDMIGYKPGPWMKWSWTVITPLLCVACFIFSLAKYTPLT 531

  Fly   534 YNGQEFPLVYRV-------VGW--------CVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIK 583
            ||      .|.|       :||        |:...::..:.         :..|||..||.....
 Frog   532 YN------KYYVYPDWAIGLGWVLALSSMICIPLVVVFHIV---------RSDGSLIERIKAVTA 581

  Fly   584 P 584
            |
 Frog   582 P 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 175/486 (36%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 192/560 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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