DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a12

DIOPT Version :10

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_031754510.1 Gene:slc6a12 / 100492029 XenbaseID:XB-GENE-6033368 Length:612 Species:Xenopus tropicalis


Alignment Length:594 Identity:217/594 - (36%)
Similarity:331/594 - (55%) Gaps:44/594 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPI 104
            |.....|:.:.|..|.:.:||::|.....:|||||||||:...:||||||.||||:.||..|.|:
 Frog    24 EGRHREPEIEDRGQWSNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPV 88

  Fly   105 YYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPW 168
            :::|..|||::|:|.:..: ...||..|:|||..:..|.|..||..::|..|.|.|.||.:||||
 Frog    89 FFLETALGQYTSQGGITAWRKICPLFEGIGYASQVIEGYLNIYYIVILAWALFYLFSSFTAELPW 153

  Fly   169 SFCREEWG-DGCVSASGGQPLQGQLSRNF------SSSTQLYLQRIVLNETDSLEEGIGYPSGSL 226
            :.|...|. :.|:...|       .|.||      :||...:.:|.||:.::.:|. :|.....|
 Frog   154 ATCNNTWNTEHCIDFVG-------KSENFTSLENSTSSVVEFWERRVLHLSEGIEH-LGNVRWDL 210

  Fly   227 ALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKL 291
            ||.|.::|:.....|.:||||:||..|..|.||||::.|||||.:||||||:|::::|.|...:|
 Frog   211 ALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYVMLIILLVRGVTLPGAYEGIIFYLKPDMTRL 275

  Fly   292 LEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGN 356
            .:||||.:|.||:|||.|:|.|.:....|||::.:|.|||...:..|::.||.::|..||.:||.
 Frog   276 QDPQVWMDAGTQIFFSYAICQGCLTALGSYNKYNNNCYRDCIALCFLNSITSFVAGFAIFSVLGF 340

  Fly   357 LAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTV 421
            :|.|.|. .|:.|.::|||||||:||.|:....:.| ::|.|||.||..||:.|....|..::|.
 Frog   341 MAQEQGV-PISEVAESGPGLAFIAYPKAVTMMPVSP-LWSCLFFLMLIFLGLDSQFVCVESLVTA 403

  Fly   422 LKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIA 480
            :.|.|.:|     :....:::::||.:|:|||.:|.||.::..|.|::..:...|: .||||:|.
 Frog   404 IVDMFPHVFRKKYRREFFILAVAVICYLLGLILLTEGGMYVFQLFDYYAASGTCLLFVAIFEVIC 468

  Fly   481 VGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQ-EFPLVYR 544
            ||::||..|...:.|.|:..:.....:.||...||.|.|...::||:...||.||.: .:|....
 Frog   469 VGYVYGANRFYDNIEDMIGYRPWPLVKYCWLFATPAVCLGTFLFSLIKYSPLKYNNRYVYPSWGY 533

  Fly   545 VVGWCVS----GCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPKKLMDYQMFLRN 605
            .:||.::    .||....||     ...:.|||...|:...:.||:|.  ..|||.:        
 Frog   534 AIGWLMALSSMICIPIYAFY-----IILRTKGSFTQRLKQLVTPHTDL--PQPKKYL-------- 583

  Fly   606 KDEENSKNV 614
            ||..:.|.:
 Frog   584 KDRADPKQI 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 188/487 (39%)
slc6a12XP_031754510.1 SLC5-6-like_sbd 34..572 CDD:444915 206/552 (37%)

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