DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a17

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002933031.1 Gene:slc6a17 / 100490416 XenbaseID:XB-GENE-964419 Length:725 Species:Xenopus tropicalis


Alignment Length:567 Identity:190/567 - (33%)
Similarity:308/567 - (54%) Gaps:82/567 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVV 100
            |..||.|....||.|   |.:.|:::::.|..|||||||||||:...:|||||:::|||::|.::
 Frog    47 PKQLEDSSELEDRPA---WNNKLQYILAQIGYSVGLGNVWRFPYLCQKNGGGAYMVPYLILLIII 108

  Fly   101 GKPIYYMEMLLGQFSSRGIVQVFDF-APLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFAS 164
            |.|::::|:.:||...||.:.|::: .|.:.|:|||..:....:..||..::..::.|||.||..
 Frog   109 GIPLFFLELAVGQRIRRGSIGVWNYICPRLGGIGYASCVVCFFVGLYYNVIIGWSIFYFFQSFQY 173

  Fly   165 ELPWSFCREEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALM 229
            .|||        :.|.:...|.....:...:.||:|..:..|..|:.::|:.||.|. :..:.|.
 Frog   174 PLPW--------NECPTVKNGSVNVVEAECDKSSATTFFWYREALDISNSISEGGGL-NWKMTLC 229

  Fly   230 LGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEP 294
            |.::|..|.:.:|:|::||||..|..:||||||:...|:|.|.|.|:.||:::.|||:.||:|:|
 Frog   230 LLVAWTMVCMAMIKGIQSSGKVMYFSSLFPYVVLICFLIRGLFLRGSVDGILHMLTPKVEKMLDP 294

  Fly   295 QVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILG---- 355
            |||..|.|||||:|.:.||.:|.:||||:..:|...||.:|:.::.|||:|:.:::|.:||    
 Frog   295 QVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCQFDAALVSFINFFTSVLATLVVFAVLGFKAN 359

  Fly   356 --------------------------------NLAHESGTKDIA---SVVKA------------- 372
                                            |.:|.: |:|.|   .|:|.             
 Frog   360 VMNEKCVVQNAEKILGYINTHDIDYSLIPPHVNFSHLT-TEDYAKMYQVIKTVKEDHFQDLHLDA 423

  Fly   373 ------------GPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQ 425
                        |.|||||::.:|:..|...| .:|::||.||..||:||.:|.:|.|:|.:.|.
 Frog   424 CVLEDELDKAVQGTGLAFIAFTEAMTHFPASP-FWSVMFFFMLINLGLGSMIGTMSGIITPIIDT 487

  Fly   426 FVNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRL 490
            | .|:..|:.||..::.||:|||::...|.:.:.:.|.:..|....:..|.|.|||.|:||||:.
 Frog   488 F-KVRKEILTVSCCIVAFLLGLIFVQRSGNYFVNMFDDYSATLPLTIVVILENIAVAWVYGTKKF 551

  Fly   491 CQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSL--LTMRPLSYN 535
            .|:...||..:..:||...|..|:|:.|.::|..|:  |.:.|..|:
 Frog   552 MQELTEMLGFRPYSYYFYSWKYVSPIFMAILLTASVIQLGISPPGYS 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 179/538 (33%)
slc6a17XP_002933031.1 SLC6sbd_NTT4 59..647 CDD:271403 185/555 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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