DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and LOC100490052

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002942758.1 Gene:LOC100490052 / 100490052 -ID:- Length:649 Species:Xenopus tropicalis


Alignment Length:573 Identity:215/573 - (37%)
Similarity:323/573 - (56%) Gaps:47/573 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SELSPDRKA---RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKP 103
            :||:|...|   |:.||...|||:|||...||||||||||:....||||||||||.::||..|.|
 Frog    58 AELAPPAPAGPPRETWGGKYEFLLSCIGYCVGLGNVWRFPYLCYRNGGGAFLIPYSIMLFFTGLP 122

  Fly   104 IYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPW 168
            ::.||:.|||:.:.|.:.|:...|:::|:|...||...:::.||..::|.|..|...||.|.|||
 Frog   123 LFLMELSLGQYGAAGPITVWKCCPILKGIGIGMLLVSALVSLYYNVIIAWTFYYLGQSFQSPLPW 187

  Fly   169 SFCREEWGDGCVSASGGQPLQGQLSRNFS------SSTQLYLQRIVLNETDSLEEGIGYP---SG 224
            |         |.||     |..||.:|.:      |:|:.:....||..|.|  .|:|.|   ..
 Frog   188 S---------CDSA-----LYSQLCQNGTSNGSQFSATEAFWNEKVLGVTHS--SGLGDPGPVGW 236

  Fly   225 SLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE 289
            .|||.|..:|..:.|.:::|:.||||..|..|.|||.||.:|::|..||.|:.|||.::||..|:
 Frog   237 ELALCLLAAWFIIFLCMLKGIHSSGKIVYFTATFPYFVMVVLIIRGATLEGSIDGVRFYLTADWK 301

  Fly   290 KLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGIL 354
            :|...|||.:|.:|:|:||.:.||.::..:|||:|.:||.||..::...:..||..:|..||.:|
 Frog   302 RLQSAQVWNDAASQIFYSLGIGFGGLLSMASYNKFNNNVIRDTLVIAIGNCSTSFFAGFAIFSVL 366

  Fly   355 GNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFP-QVF-SLLFFAMLFMLGVGSNVGMVSC 417
            |::|.:.|. .:..|..:||||||::||:|:|   :.| .|| |:|||.|||.|||.:..|.:..
 Frog   367 GHMAWKKGV-PVGQVADSGPGLAFVAYPEALA---LLPGSVFWSILFFLMLFTLGVDTLFGNMEG 427

  Fly   418 IMTVLKDQFVNVKLW----IIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFEL 478
            |.|.:.|:..:::.|    |.:..|....:|:||:.||.||.:..||:|.:..:|..::.|:|..
 Frog   428 ITTAILDEIPSLRDWKRKTIFLGCLCFAFYLLGLLLITQGGIYWFTLIDSYSTSFGLIIIALFMC 492

  Fly   479 IAVGWIYGTKRLCQDAEYMLN------IKTSNYYRICWSIVTPLVMLVILVYSLLTM--RPLSYN 535
            :.:.:.||..:.|||...|::      .|...|::.||..:|||::|.||.|..|.|  .||.|.
 Frog   493 LGIAFFYGVNQFCQDILDMVSQCPPWCTKVLWYFKACWVFITPLLLLFILFYIFLEMYNTPLRYG 557

  Fly   536 GQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDW 588
            ...:|...:.:|.|:......|:..||..|..|: .|:||.|...|::|.:.|
 Frog   558 AYVYPRWGQALGICMGTLCCIQIPIWATVAVLKE-TGTLKERFKKSLRPLNTW 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 190/494 (38%)
LOC100490052XP_002942758.1 SLC5-6-like_sbd 70..610 CDD:382020 211/561 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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