DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a3

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002933174.1 Gene:slc6a3 / 100488824 XenbaseID:XB-GENE-982873 Length:621 Species:Xenopus tropicalis


Alignment Length:605 Identity:206/605 - (34%)
Similarity:318/605 - (52%) Gaps:60/605 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            :..||:.|         |:::.:...|:.|...::||:|.|..:|.|.||||||:...:||||||
 Frog    43 TNSALVSP---------SQINTENGERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAF 98

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALT 154
            |:||:..:.:.|.|::|||:.||||:..|...|:...|:.:||||..:|....:..:|..::|..
 Frog    99 LVPYIFFMVIAGMPLFYMELALGQFNREGAAGVWKICPIFKGVGYTVILISLYVGFFYNVIIAWA 163

  Fly   155 LRYFFDSFASELPWSFCREEWGD-GCVSASGGQPLQGQLSRNFSSSTQL-------------YLQ 205
            |:|.|.||.|||||..|...|.. .|....         ..|||..:..             |.:
 Frog   164 LQYLFSSFTSELPWIHCNNSWNSPNCSETK---------YSNFSDYSLFGLNDTYKVTPAAEYFE 219

  Fly   206 RIV--LNETDSLEEGIGYPSGSLALMLGISWLTVTLIII-----RGVKSSGKAAYVLALFPYVVM 263
            |.|  |:|:..:.: :|.|...|.     |.|.|.::.:     :|||:|||..::.|..||||:
 Frog   220 RGVLHLHESQGIHD-LGSPRWKLT-----SCLIVVIVFLYFSLWKGVKTSGKVVWITATMPYVVL 278

  Fly   264 FILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNV 328
            ..||:|.:|||||.||:..:|:..:.:|.|..||.:|.||:.|||.|.|||:|.:||||:|.:|.
 Frog   279 TALLLRGVTLPGAIDGIKAYLSVDFLRLCEASVWIDAATQICFSLGVGFGVLIAFSSYNKFTNNC 343

  Fly   329 YRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQ 393
            ||||.|.|::::.||..||.:||..||.:|.:... .|..|.|.||||.||.||:|||...: ..
 Frog   344 YRDAIITTSVNSLTSFFSGFVIFSFLGYMAQKHNV-PIGDVAKDGPGLIFIIYPEAIATLPL-SS 406

  Fly   394 VFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVK-------LWIIVVSLSVIGFLVGLIYIT 451
            |:|::||.||..||:.|.:|.:..::|.|.|:|..::       |:|::.:     |...|..:|
 Frog   407 VWSVIFFIMLLTLGIDSAMGGMESVITGLIDEFKFLRRHRELFTLFIVLCT-----FFTSLSCVT 466

  Fly   452 PGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPL 516
            .||.::.||:|........|...:.|.|.:.|.||..|...|.|.|:..:...|:|:||..|:|.
 Frog   467 NGGIYVFTLLDHFAAGTSILFGVLIEAIGIAWFYGVGRFSDDIEEMIGKRPGLYWRLCWKFVSPC 531

  Fly   517 VMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNS 581
            .:|.::|.|::|.|...|....||....|:||.|:...:..:..:|.| .|....||.:.:|..:
 Frog   532 FLLFVVVVSIVTYRSPKYGNYTFPEWANVIGWLVAISSMAMVPLYAIY-KFSSLHGSFREKIAYA 595

  Fly   582 IKPHSDWGPSDPKKLMDYQM 601
            |.|..::...:..|:..:.:
 Frog   596 ITPEKEYELIESGKIRQFTL 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 182/501 (36%)
slc6a3XP_002933174.1 SLC6sbd_DAT1 60..615 CDD:212083 202/577 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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