DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a3

DIOPT Version :10

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002933174.1 Gene:slc6a3 / 100488824 XenbaseID:XB-GENE-982873 Length:621 Species:Xenopus tropicalis


Alignment Length:605 Identity:206/605 - (34%)
Similarity:318/605 - (52%) Gaps:60/605 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            :..||:.|         |:::.:...|:.|...::||:|.|..:|.|.||||||:...:||||||
 Frog    43 TNSALVSP---------SQINTENGERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAF 98

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALT 154
            |:||:..:.:.|.|::|||:.||||:..|...|:...|:.:||||..:|....:..:|..::|..
 Frog    99 LVPYIFFMVIAGMPLFYMELALGQFNREGAAGVWKICPIFKGVGYTVILISLYVGFFYNVIIAWA 163

  Fly   155 LRYFFDSFASELPWSFCREEWGD-GCVSASGGQPLQGQLSRNFSSSTQL-------------YLQ 205
            |:|.|.||.|||||..|...|.. .|....         ..|||..:..             |.:
 Frog   164 LQYLFSSFTSELPWIHCNNSWNSPNCSETK---------YSNFSDYSLFGLNDTYKVTPAAEYFE 219

  Fly   206 RIV--LNETDSLEEGIGYPSGSLALMLGISWLTVTLIII-----RGVKSSGKAAYVLALFPYVVM 263
            |.|  |:|:..:.: :|.|...|.     |.|.|.::.:     :|||:|||..::.|..||||:
 Frog   220 RGVLHLHESQGIHD-LGSPRWKLT-----SCLIVVIVFLYFSLWKGVKTSGKVVWITATMPYVVL 278

  Fly   264 FILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNV 328
            ..||:|.:|||||.||:..:|:..:.:|.|..||.:|.||:.|||.|.|||:|.:||||:|.:|.
 Frog   279 TALLLRGVTLPGAIDGIKAYLSVDFLRLCEASVWIDAATQICFSLGVGFGVLIAFSSYNKFTNNC 343

  Fly   329 YRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQ 393
            ||||.|.|::::.||..||.:||..||.:|.:... .|..|.|.||||.||.||:|||...: ..
 Frog   344 YRDAIITTSVNSLTSFFSGFVIFSFLGYMAQKHNV-PIGDVAKDGPGLIFIIYPEAIATLPL-SS 406

  Fly   394 VFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVK-------LWIIVVSLSVIGFLVGLIYIT 451
            |:|::||.||..||:.|.:|.:..::|.|.|:|..::       |:|::.:     |...|..:|
 Frog   407 VWSVIFFIMLLTLGIDSAMGGMESVITGLIDEFKFLRRHRELFTLFIVLCT-----FFTSLSCVT 466

  Fly   452 PGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPL 516
            .||.::.||:|........|...:.|.|.:.|.||..|...|.|.|:..:...|:|:||..|:|.
 Frog   467 NGGIYVFTLLDHFAAGTSILFGVLIEAIGIAWFYGVGRFSDDIEEMIGKRPGLYWRLCWKFVSPC 531

  Fly   517 VMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNS 581
            .:|.::|.|::|.|...|....||....|:||.|:...:..:..:|.| .|....||.:.:|..:
 Frog   532 FLLFVVVVSIVTYRSPKYGNYTFPEWANVIGWLVAISSMAMVPLYAIY-KFSSLHGSFREKIAYA 595

  Fly   582 IKPHSDWGPSDPKKLMDYQM 601
            |.|..::...:..|:..:.:
 Frog   596 ITPEKEYELIESGKIRQFTL 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 182/501 (36%)
slc6a3XP_002933174.1 SLC6sbd_DAT1 60..615 CDD:212083 202/577 (35%)

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