DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a7

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002940131.3 Gene:slc6a7 / 100487063 XenbaseID:XB-GENE-479449 Length:634 Species:Xenopus tropicalis


Alignment Length:602 Identity:239/602 - (39%)
Similarity:335/602 - (55%) Gaps:47/602 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PSLL--PMALESSELSPD-RKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPY 93
            |.||  |...:.:||..: .:.|.||...|:||:|||...||||||||||:.|..||||||||||
 Frog    15 PDLLMSPSDRDDTELDIEYPEDRGNWSGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLIPY 79

  Fly    94 LVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYF 158
            .::|.:.|.|:::||:.||||||.|.:.|:..:||.:|||...||.:.::|.||..::|..|.|.
 Frog    80 FIMLAICGIPLFFMELSLGQFSSLGPLAVWKISPLFKGVGMGMLLIVALVAIYYNMIIAYVLFYL 144

  Fly   159 FDSFASELPWSFCREEWG-DGC----VSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEG 218
            |.|..|.|||..|...|. |.|    |..:....|...:|...|.|.: |..|.||:...|  .|
 Frog   145 FASLTSSLPWEHCGNWWNTDLCLDHHVIRASNSALLVNISNTVSPSEE-YWSRYVLHIQGS--SG 206

  Fly   219 IGYPS---GSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGV 280
            ||.|.   ..|.|.|.:||..|.|.|::|||||||..|..|.|||:::.:||:|.:||.||:.|:
 Frog   207 IGDPGQLRWKLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPYIILVMLLIRGVTLEGAWIGI 271

  Fly   281 MYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLL 345
            .::||||:|.||..:||..|..|:|:||.|.||.::.::|||.|..|:|||..|||..:.|||:|
 Frog   272 KFYLTPQFEHLLTSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAFTSIL 336

  Fly   346 SGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGS 410
            :|..||.:||.::.|.|. .:..|.||||||||:.||.|:....:.| .:|.|||.||..||:.|
 Frog   337 AGFAIFSVLGYMSQELGV-PVDQVAKAGPGLAFVVYPQAMTMLPLSP-FWSFLFFFMLLTLGLDS 399

  Fly   411 NVGMVSCIMTVLKDQF---VNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV 472
            ....:..|:|.:.|:|   :..|..:....:.|..||:|||..|.||.:.:.|:|.:...|..||
 Frog   400 QFAFMETIVTAITDEFPYYLRPKKAVFSAIICVALFLLGLILATDGGMYWLVLLDDYSAGFGLLV 464

  Fly   473 SAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQ 537
            ..|...::|..:||.|..|:|.:.||..|...|::.||..::|:.::.:|.||:|..:|..|...
 Frog   465 IVITFCLSVSRVYGIKNFCRDIQMMLGFKPGLYFKACWIFLSPVTLMCLLAYSILKYQPSQYGSY 529

  Fly   538 EFPLVYRVVGWCVS--GCI---IGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPS------ 591
            :|||....:|..:.  .|:   ||.|     .|..|: :|||..||..:.:|..|||||      
 Frog   530 KFPLWSEALGILMGLLSCMMIPIGML-----VAILKE-EGSLWERIRQASRPAMDWGPSMEENRT 588

  Fly   592 -----------DPKKLM 597
                       .||.||
 Frog   589 GMYVNTLAGSQSPKPLM 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 203/484 (42%)
slc6a7XP_002940131.3 SLC5-6-like_sbd 37..581 CDD:382020 226/554 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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