DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a2

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017948962.2 Gene:slc6a2 / 100486589 XenbaseID:XB-GENE-486549 Length:624 Species:Xenopus tropicalis


Alignment Length:574 Identity:203/574 - (35%)
Similarity:324/574 - (56%) Gaps:46/574 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ELSPD-------RKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVV 100
            :|||.       ::.|:.||..::||:|.:..||.|.|||||||...:||||||||||.:.|.:.
 Frog    48 DLSPQYEVPGEGQQEREQWGKKIDFLLSVVGFSVDLANVWRFPFLCYKNGGGAFLIPYTLFLIIA 112

  Fly   101 GKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASE 165
            |.|::|||:.|||::..|...|:...||.:||||..:|....:..||..::|.:|.|...||.||
 Frog   113 GMPLFYMELALGQYNREGAATVWKICPLFKGVGYTVILIALYVGFYYNVIIAWSLYYLVSSFTSE 177

  Fly   166 LPWSFCREEWGDGCVSASGGQPL---QGQLSRNFSSS-------TQLYLQRIV-LNETDSLEEGI 219
            |||..|..||.    |.:...|:   ...:|.|...|       .:.|.:.:: |:|::.:.: :
 Frog   178 LPWIKCGNEWN----SLNCTDPMLLNMSMISYNTKYSKFKTTPAAEFYERGVLHLHESNGIHD-L 237

  Fly   220 GYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFL 284
            |.|...|.:.|.:..:.:...:.:|||:|||..::.|..||||:|:||:|.:||||:..|:..:|
 Frog   238 GQPRWQLTICLIVVLIVLFFSLWKGVKTSGKVVWITATLPYVVLFVLLIRGITLPGSSKGISAYL 302

  Fly   285 TPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVI 349
            ....::|.:..||.:|.||:|:||...|||:|.::|||:|.:|.||||.:.:|::..||.:||..
 Frog   303 HIDIKRLTDASVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALMTSTINCVTSFISGFA 367

  Fly   350 IFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKF--KMFPQVFSLLFFAMLFMLGVGSNV 412
            ||.|||.:||:... :|..|...|.||.||.||:||:..  ..|   ::::||.||..||:.|.:
 Frog   368 IFSILGYMAHKHNV-NIEDVATEGAGLVFIIYPEAISTLAGSTF---WAVVFFIMLLTLGIDSAM 428

  Fly   413 GMVSCIMTVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV 472
            |.:..::|.|.|. :::     ||:.::|:.  |.|:..|:.||.||.:::||:|    ||.:..
 Frog   429 GGMEAVITGLADD-ISILKRHRKLFTLLVAF--ITFIFALLCITNGGIYVLTLLD----TFAAGT 486

  Fly   473 SAIF----ELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLS 533
            |.:|    |.|.|.|.||..|..:|...||..:...|:|:||..|:|..:|.:::.|::|.:||.
 Frog   487 SILFAVLIEAIGVSWFYGVDRFSEDIHRMLGFRPGLYWRLCWKFVSPAFLLFVVIVSIVTYKPLM 551

  Fly   534 YNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSD 587
            |:..:||......||.::...:..:..:..| .|...:|||:.|:...|.|.::
 Frog   552 YDEYKFPPWANRTGWAIALSSMTLVPIYIIY-KFLTMRGSLRERLAYCITPENE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 182/495 (37%)
slc6a2XP_017948962.2 SLC5-6-like_sbd 63..622 CDD:382020 200/559 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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