DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a2

DIOPT Version :10

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017948962.2 Gene:slc6a2 / 100486589 XenbaseID:XB-GENE-486549 Length:624 Species:Xenopus tropicalis


Alignment Length:574 Identity:203/574 - (35%)
Similarity:324/574 - (56%) Gaps:46/574 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ELSPD-------RKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVV 100
            :|||.       ::.|:.||..::||:|.:..||.|.|||||||...:||||||||||.:.|.:.
 Frog    48 DLSPQYEVPGEGQQEREQWGKKIDFLLSVVGFSVDLANVWRFPFLCYKNGGGAFLIPYTLFLIIA 112

  Fly   101 GKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASE 165
            |.|::|||:.|||::..|...|:...||.:||||..:|....:..||..::|.:|.|...||.||
 Frog   113 GMPLFYMELALGQYNREGAATVWKICPLFKGVGYTVILIALYVGFYYNVIIAWSLYYLVSSFTSE 177

  Fly   166 LPWSFCREEWGDGCVSASGGQPL---QGQLSRNFSSS-------TQLYLQRIV-LNETDSLEEGI 219
            |||..|..||.    |.:...|:   ...:|.|...|       .:.|.:.:: |:|::.:.: :
 Frog   178 LPWIKCGNEWN----SLNCTDPMLLNMSMISYNTKYSKFKTTPAAEFYERGVLHLHESNGIHD-L 237

  Fly   220 GYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFL 284
            |.|...|.:.|.:..:.:...:.:|||:|||..::.|..||||:|:||:|.:||||:..|:..:|
 Frog   238 GQPRWQLTICLIVVLIVLFFSLWKGVKTSGKVVWITATLPYVVLFVLLIRGITLPGSSKGISAYL 302

  Fly   285 TPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVI 349
            ....::|.:..||.:|.||:|:||...|||:|.::|||:|.:|.||||.:.:|::..||.:||..
 Frog   303 HIDIKRLTDASVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALMTSTINCVTSFISGFA 367

  Fly   350 IFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKF--KMFPQVFSLLFFAMLFMLGVGSNV 412
            ||.|||.:||:... :|..|...|.||.||.||:||:..  ..|   ::::||.||..||:.|.:
 Frog   368 IFSILGYMAHKHNV-NIEDVATEGAGLVFIIYPEAISTLAGSTF---WAVVFFIMLLTLGIDSAM 428

  Fly   413 GMVSCIMTVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV 472
            |.:..::|.|.|. :::     ||:.::|:.  |.|:..|:.||.||.:::||:|    ||.:..
 Frog   429 GGMEAVITGLADD-ISILKRHRKLFTLLVAF--ITFIFALLCITNGGIYVLTLLD----TFAAGT 486

  Fly   473 SAIF----ELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLS 533
            |.:|    |.|.|.|.||..|..:|...||..:...|:|:||..|:|..:|.:::.|::|.:||.
 Frog   487 SILFAVLIEAIGVSWFYGVDRFSEDIHRMLGFRPGLYWRLCWKFVSPAFLLFVVIVSIVTYKPLM 551

  Fly   534 YNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSD 587
            |:..:||......||.::...:..:..:..| .|...:|||:.|:...|.|.::
 Frog   552 YDEYKFPPWANRTGWAIALSSMTLVPIYIIY-KFLTMRGSLRERLAYCITPENE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 182/495 (37%)
slc6a2XP_017948962.2 SLC5-6-like_sbd 63..622 CDD:444915 200/559 (36%)

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