DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a14.2

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002939711.4 Gene:slc6a14.2 / 100485126 XenbaseID:XB-GENE-855704 Length:642 Species:Xenopus tropicalis


Alignment Length:587 Identity:211/587 - (35%)
Similarity:331/587 - (56%) Gaps:47/587 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYM 107
            |.:.:.|.|.||.|..|:|:|.:..:||||||||||:...::|||||||||.::|.:.|.|::::
 Frog    25 ESTDENKERGNWSSKSEYLLSMVGYAVGLGNVWRFPYLTFQHGGGAFLIPYAIMLALAGLPLFFL 89

  Fly   108 EMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCR 172
            |..||||||.|.|.::...|:..|||...:|...::..||..::|.:|.|.|.||.|.||||.| 
 Frog    90 ECSLGQFSSLGPVAMWKVLPIFEGVGITMVLISTLVTIYYNVIIAYSLYYLFASFTSILPWSEC- 153

  Fly   173 EEWGD--------GCVSASGGQPLQGQL------SRNFS--SSTQLYLQ----------RIVLNE 211
            .||.|        |..:.:.|:...|.:      :.|::  :::.|||:          ::.|..
 Frog   154 FEWADEKCSKTPKGLCNVTIGEEDIGMVNLTWVKANNYTCIANSTLYLETELPSKQYWDKVALRR 218

  Fly   212 TDSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGA 276
            :..|.| .|.....|||.|.::|:.:...:.:|:|||||..|..|:|||.|:.|||:|..||.||
 Frog   219 SGGLHE-TGNVVWYLALCLLLAWIIIGAALFKGIKSSGKVVYFTAIFPYAVLLILLIRGATLEGA 282

  Fly   277 YDGVMYFLTPQWE--KLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLD 339
            |||:.:::..|.:  ||....||.:|.||:||||:..:|.::..||||:|.:|.|.||.:|...:
 Frog   283 YDGISFYIGTQSDISKLSNADVWKDAATQIFFSLSTAWGGLVALSSYNKFHNNCYADAIMVCITN 347

  Fly   340 TFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLF 404
            ..||:.:|..||.|||::|.:: .|::..||.:|..||||:||:|:::..:.| ::|:|||.||.
 Frog   348 CLTSVFAGFAIFSILGHMAFKA-EKEVKDVVDSGFALAFIAYPEALSQLPVAP-LWSILFFFMLL 410

  Fly   405 MLGVGSNVGMVSCIMTVLKDQFVNV--KL-WIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGV 466
            .||:.|....|..|.|.:.|.:..|  |: .||.|...::.||:|::.:|..|.:.:.|:|:...
 Frog   411 TLGLDSQFASVETITTTIHDAYPKVMKKMRGIITVGACIMFFLLGILCVTQSGIYWVDLIDYFCA 475

  Fly   467 TFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNY---YRICWSIVTPLVMLVILVYSLLT 528
            .:..|::||.||:.:.||||..|..:|.|.|:..|...:   :|:||..:|||::.||.::||:|
 Frog   476 GWGILIAAILELVGICWIYGGNRFIEDIEMMIGKKHWIFWLWWRLCWFFLTPLLLTVIFIWSLVT 540

  Fly   529 MRPLSYNGQEFPLVYRVVGWC-VSGCIIGQLFYW---AGYANFKQPKGSLKSRINNSIKPHSDWG 589
            .....:....:|.....:||| :..|||     |   .......:.||:|..|......|..:||
 Frog   541 FDTPKHGNVAYPSWGVALGWCMIIFCII-----WIPILAVVKIIKAKGTLWERFLKICAPTPEWG 600

  Fly   590 PS 591
            |:
 Frog   601 PA 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 189/507 (37%)
slc6a14.2XP_002939711.4 SLC5-6-like_sbd 33..612 CDD:382020 209/579 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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