DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a13

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002667408.5 Gene:slc6a13 / 100332592 ZFINID:ZDB-GENE-170607-2 Length:621 Species:Danio rerio


Alignment Length:563 Identity:204/563 - (36%)
Similarity:310/563 - (55%) Gaps:42/563 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQ 113
            |.|..|.:.|||::|.....:|||||||||:...:||||||.||||:.||..|.|::::|:.|||
Zfish    28 KDRGQWSNKLEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLEISLGQ 92

  Fly   114 FSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG- 176
            ::|.|.:..: ..:||..|:|||..:.:.:|..||..|:|..:.|..:||...||||.|...|. 
Zfish    93 YTSEGGITCWRKISPLFEGIGYATQVIVALLNFYYIIVLAWGIFYLSNSFTWNLPWSSCNNTWNT 157

  Fly   177 DGCVSASGGQPLQGQLSRNFSSSTQLYL-----------QRIVLNETDSLEEGIGYPSGSLALML 230
            :.|:          :..|...|..|.||           :|.||..:..:|: ||.....|.|.|
Zfish   158 ESCM----------EFQRRNDSVDQSYLDNATSPVIEFWERRVLRISSGIED-IGTLHWDLVLCL 211

  Fly   231 GISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQ 295
            .::|:.....|.:||||:||..|..|.||||::.|||:|.:|||||..|:.::|.|...:|.:||
Zfish   212 LLAWVLCYFCIWKGVKSTGKVVYFTATFPYVMLLILLIRGVTLPGASRGIQFYLYPDLGRLADPQ 276

  Fly   296 VWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHE 360
            ||.:|.||:|||.|:|.|.:....|||::.:|.|||:..:..|::.||.::|..||.|||.:::|
Zfish   277 VWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDSLALCFLNSGTSFVAGFAIFSILGFMSYE 341

  Fly   361 SGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQ 425
            ... .|:.|.::|||||||:||.|::...:.| :::..||.|:.:||:.|....|..::|.:.|.
Zfish   342 QNV-PISEVAESGPGLAFIAYPRAVSMMPISP-LWACFFFIMIVLLGLDSQFVCVESLVTAMVDM 404

  Fly   426 FVNV-------KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVG 482
            :.:.       :|.|:||  :::.||||||.:|.||.::..|.|::..:.:.|: .||||.:.:.
Zfish   405 YPSFFRRKNRRELLILVV--AIVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETVCIA 467

  Fly   483 WIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQ-EFPLVYRVV 546
            ||||..|...:.|.|:..:...|.:.||...||........:||:...||.||.: .:|.....:
Zfish   468 WIYGANRFYDNIEDMIGYRPGPYIKYCWLFFTPATCFGTFAFSLIKYTPLKYNNEYVYPWWGYAL 532

  Fly   547 GW--CVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSD 587
            ||  .:|..|...|  |..| .....||||..|:...|:|..|
Zfish   533 GWMLALSSMICVPL--WVIY-RMGTTKGSLMERVQFLIRPSPD 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 180/494 (36%)
slc6a13XP_002667408.5 SLC6sbd-TauT-like 30..569 CDD:271387 201/556 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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