DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a18

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001108369.1 Gene:slc6a18 / 100141332 ZFINID:ZDB-GENE-080219-9 Length:618 Species:Danio rerio


Alignment Length:623 Identity:205/623 - (32%)
Similarity:311/623 - (49%) Gaps:136/623 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGK 102
            |.|:|.:    :.|..|.:.:::|::|:..:|||||:||||:.....||||||||||:.|...|.
Zfish     4 ASETSSV----QERPKWDNKVQYLLTCVGFAVGLGNIWRFPYLCQIYGGGAFLIPYLIALVFEGL 64

  Fly   103 PIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASEL 166
            |:.|:|:.:||...:|.:.|: ..:||:.|||.|.::...::..:|.:::|..|.|||.||...|
Zfish    65 PLLYLELAIGQSLRKGSIGVWHSISPLLGGVGVASMVVSFLVGLFYNTILAWVLWYFFHSFEDPL 129

  Fly   167 PWSFC-----REEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGS- 225
            |||.|     .|.:.:.|||               |:....|..|..||.:..:|:     ||| 
Zfish   130 PWSQCPINDNLEGYVEECVS---------------STPVNYYWYRQTLNISPDIEQ-----SGSL 174

  Fly   226 ---LALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQ 287
               |.|.|..:|..|.:..|||:::.|||.||.|.|||:|:.|.||||||||||.||:.|..||.
Zfish   175 QWTLVLCLATAWSIVYICFIRGIETIGKAVYVTATFPYLVLTIFLVRALTLPGATDGLQYLFTPD 239

  Fly   288 WEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFG 352
            |..|..||||.:|.||:||||::.||.:|.:||||...::..|||..|..:::.|||.:.:.||.
Zfish   240 WTLLTNPQVWLDAATQIFFSLSLAFGGLIAFSSYNPKKNDCERDALFVGIINSATSLYASIPIFA 304

  Fly   353 ILGNLA------------------------------HESGTKDIAS--------------VVK-- 371
            |||..|                              ::|..:|:.:              |:|  
Zfish   305 ILGFKATSNFNSCVNSNILDLTNAFDIGDRNITIENYDSWLRDLNASDPDRVSSLNLKHCVLKNF 369

  Fly   372 -----AGPGLAFISYPDAIAKFKMFP--QVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV 429
                 :|.|||||.:.:|:.:   .|  ||:::|||.|||.||:.|..|.:..::|.|.|..: |
Zfish   370 LDQSASGTGLAFIVFTEAVIE---MPGSQVWAVLFFVMLFSLGLSSMFGNLEGVLTPLLDLHM-V 430

  Fly   430 KLW----IIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRL 490
            ..|    |....:.|:.|||.||:....|.:.:.:.:.:..:...||.|.||:|||...||.||.
Zfish   431 PRWMPKEIFTGLICVVNFLVALIFTLGSGNYWLEIFNSYVGSVPLLVIAFFEIIAVVCFYGIKRF 495

  Fly   491 CQDAEYMLNIKTSNYYRICWSIVTPLVMLVILV-YSLLTMR--PL--SYNGQEFPLVYRVVGWCV 550
            ..|.|.|...:.:.::|.||..::|:::||:|| |.::.::  |.  ::|.|             
Zfish   496 SDDIEQMTGRRPNLFWRCCWMGISPVMLLVVLVAYVVVQVQKHPTYPAWNPQ------------- 547

  Fly   551 SGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDW 588
                         |.||.:.:.          ||:|.|
Zfish   548 -------------YENFPETEE----------KPYSTW 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 191/541 (35%)
slc6a18NP_001108369.1 SLC5-6-like_sbd 12..587 CDD:294310 202/611 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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