DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and XB5944457

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001106493.1 Gene:XB5944457 / 100127682 XenbaseID:XB-GENE-5944458 Length:599 Species:Xenopus tropicalis


Alignment Length:601 Identity:212/601 - (35%)
Similarity:342/601 - (56%) Gaps:44/601 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VSGGLPKLETSRCAGSGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNV 74
            |:.|....|.|....:.:   ||..|.:.::..:  .:...||.|....:|||||:..::|||||
 Frog     8 VADGQISTEVSEAPVTND---KPKTLVVKVQKKK--TEEVERDTWKGRFDFLMSCVGYAIGLGNV 67

  Fly    75 WRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLA 139
            ||||:...:||||||||||.:.|...|.|::.:|..|||::|.|.:.|:..||:.:|||.|..:.
 Frog    68 WRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVL 132

  Fly   140 LGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DGCVS----ASGGQPLQGQLSRNFSSS 199
            ...|..||..::|..:.|.::||.:.|||..|...|. :.|.|    |:         :.|.:|:
 Frog   133 SFWLNIYYIVIIAWAIYYLYNSFTTTLPWKHCDNSWNTERCFSNYSIAN---------TTNMTSA 188

  Fly   200 TQLYLQRIVLNETDSLEE--GIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVV 262
            ...:.:|.:...||.||:  .|.:|   ||:.|.|:|:.|...|.:||..:||..|..|.:||::
 Frog   189 VVEFWERNMHQMTDGLEKPGQIRWP---LAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYIM 250

  Fly   263 MFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHN 327
            :.||..|.:|||||.||:::::||::.||.:.:||.:|.||:|||..:..|.:|...|||||.:|
 Frog   251 LVILFFRGVTLPGALDGILFYITPKFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNRFHNN 315

  Fly   328 VYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFP 392
            ||||:.||..:::.||:.:|.:||.|:|.:||.: .:.|..|..:||||||::||:|:.:..:.|
 Frog   316 VYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVT-KRPIEQVAASGPGLAFLAYPEAVTQLPISP 379

  Fly   393 QVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQF---VNVKLWIIVVSLSVIGFLVGLIYITPGG 454
             ::::|||:||.|||:.|....|...:|.|.|:|   :..:..|.:..:.|:.:||||..||.||
 Frog   380 -LWAVLFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRTRREIFIAVVCVVSYLVGLSNITQGG 443

  Fly   455 QHIITLMDFHGVTFVSLVSAI-FELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVM 518
            .::..|.|::..:.:||:..: ||.|::.|.||..|...:.|.|:..:...::::|||..||:::
 Frog   444 IYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFYDNIEEMVGYRPCIWWKLCWSFFTPIIV 508

  Fly   519 LVILVYSLLTMRPLSYNGQEFPLVYRVVGW--CVSGCII--GQLFYWAGYANFKQPKGSLKSRIN 579
            ..:.::|.:.|.||:.....||...:.|||  .:|..::  |.:.|.     |...|||||.|:.
 Frog   509 AGVFLFSAVQMTPLTMGSYVFPSWGQGVGWFMALSSMVLIPGYMVYL-----FLSLKGSLKQRLQ 568

  Fly   580 NSIKP-----HSDWGP 590
            ..|:|     .|:.||
 Frog   569 VMIQPTEEVVRSENGP 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 180/484 (37%)
XB5944457NP_001106493.1 SLC6sbd_GAT1 2..599 CDD:212075 212/601 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.