DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a14.1

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_002939712.3 Gene:slc6a14.1 / 100127180 XenbaseID:XB-GENE-480827 Length:634 Species:Xenopus tropicalis


Alignment Length:627 Identity:218/627 - (34%)
Similarity:338/627 - (53%) Gaps:82/627 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KDLKTEILVSGGLPKLETSRCAGSGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIA 66
            ||:|.|             ..:|||:                   :.|.|.||....::|:|.|.
 Frog    15 KDVKQE-------------SHSGSGD-------------------ENKERGNWSKKSDYLLSMIG 47

  Fly    67 LSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRG 131
            .:||||||||||:.|.:||||||||||.::|.:.|.|::::|..:|||||.|.|.|:...|:::|
 Frog    48 YAVGLGNVWRFPYLAYKNGGGAFLIPYTIMLALAGLPLFFLECSMGQFSSSGPVLVWRAVPILQG 112

  Fly   132 VGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGD-GCVSASGG---------- 185
            ||...:|....::.||..::|.:|.|.|.||.:.||||.| ..|.| .|...:.|          
 Frog   113 VGITMVLVTTFVSIYYNIIIAYSLYYMFASFQTILPWSDC-FAWADEKCSKVTRGFCNVSLSNNT 176

  Fly   186 --QPLQGQLSRNFSS------------STQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLT 236
              ..|.....||.:.            .::.|.:::.|..:..|:| .|.....|||.|.::|:.
 Frog   177 VAYNLTWVKERNLTCIENSIVMEDVDLPSKQYWEKVTLRLSGGLDE-TGEIVWYLALCLLLAWII 240

  Fly   237 VTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE--KLLEPQVWYN 299
            |...:.:|:|||||..|..|:|||:|:.|||||..||.||::|:.|::..:..  ||:|.:||.:
 Frog   241 VGAALFKGIKSSGKVVYFTAIFPYIVLIILLVRGATLEGAFNGIDYYIGTKSNITKLMEAEVWKD 305

  Fly   300 AVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTK 364
            |.||:||||:..:|.:|..||||:|.:|.|.||.:|...:..||:.:|..||.|||::|..: .|
 Frog   306 AATQIFFSLSTAWGGLIALSSYNKFHNNCYSDAIVVCVTNCLTSVFAGFAIFSILGHMAFVT-DK 369

  Fly   365 DIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV 429
            .:..||.:|.|||||:||:|:||..:.| ::|.|||.||..||:.|...|:..|:|.::|.|..:
 Frog   370 PVPEVVDSGFGLAFIAYPEALAKLPISP-LWSFLFFFMLLTLGLDSQFAMIETIITSIQDAFPQM 433

  Fly   430 --KLWI-IVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLC 491
              ::.| :.:...||.||:||:.:|..|.:.:.|:|:....:..|.||:.||:.:.||||..|..
 Frog   434 MKRMRIPVTIGCCVILFLLGLLCVTQSGIYWVNLIDYFCGGWAILFSAVLELVGINWIYGGNRFI 498

  Fly   492 QDAEYMLNIKTSNY---YRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWC-VSG 552
            :|.|.|:..|...:   :|.||.:|:||::..||::||:|....:|....:|.....:||| :..
 Frog   499 KDIEMMIGEKHWTFWIWWRACWFVVSPLLLTAILLWSLITFHSPTYGSVVYPTWGTAIGWCMICF 563

  Fly   553 CIIGQLFYW---AGYANFKQPKGSLKSRINNSIKPHSDWGPS 591
            |:|     |   .......:.||:    :..:.|...:|||:
 Frog   564 CLI-----WIPIVAVLKIIRAKGN----VLQTCKAAQNWGPA 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 192/506 (38%)
slc6a14.1XP_002939712.3 SLC6sbd_ATB0 32..628 CDD:271391 210/578 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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