DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and si:ch211-132b12.1

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001076533.1 Gene:si:ch211-132b12.1 / 100034467 ZFINID:ZDB-GENE-050420-315 Length:586 Species:Danio rerio


Alignment Length:554 Identity:197/554 - (35%)
Similarity:305/554 - (55%) Gaps:48/554 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |..|||.:|||::.....||||||||||:...:.|||||||||||.:...|.|::.:||.:||::
Zfish    11 RGYWGSKMEFLLAVAGNVVGLGNVWRFPYLCYKYGGGAFLIPYLVFVVTCGVPLFLLEMAMGQYT 75

  Fly   116 SRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DG 178
            .:|.|..:. ..||..|:||...|.|.....||..::|..|.|...||.|:|||:.|...|. |.
Zfish    76 QQGGVTCWHRLCPLAEGIGYGGQLILLYSCMYYIVILAWALFYLIFSFKSQLPWATCDNTWNTDD 140

  Fly   179 CVSASGGQPLQGQLSRNFS-SSTQL---------YLQRIVLNETDSLEEGIGYPSGSLALMLGIS 233
            |::.         :::|.: :.|.|         :.:|.||:.:..:|: ||..:..:.|.|...
Zfish   141 CINL---------VTKNLTINRTSLINSTPAATEFWERRVLSLSGGIED-IGKINWEILLCLIAM 195

  Fly   234 WLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWY 298
            |:.....:.:||||:||..|..|.||||::.:||:|.||||||..||:::|.|:..:|.:||||.
Zfish   196 WIICYFCVWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADPQVWL 260

  Fly   299 NAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGT 363
            .|.||:.||.:|..|.|.:.:|||::.:|.|||...:..|::.||.::|..:|.:||.:|.|.|.
Zfish   261 EAGTQILFSYSVSVGSITVLASYNKYHNNCYRDCLGLCLLNSVTSFVAGFAVFTVLGFMAQEQGV 325

  Fly   364 KDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVN 428
             .|..|.::|||||||:||.|:|... |||::::.||.|:.:||:.:....:..::|.:.|.|..
Zfish   326 -PIEEVAESGPGLAFIAYPQAVAMMP-FPQLWAVCFFIMIILLGLDTQFVSMEAVVTSVMDMFPV 388

  Fly   429 V-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVGWIYGT 487
            |     :..|:::...:..|....|.:|.||.::..|.|::......|: .::||.:.:|||:|.
Zfish   389 VLRREGRREILLLFFCLTCFFGQFIMVTEGGMYVFQLFDYYACNGTCLLFLSVFESLTMGWIFGA 453

  Fly   488 KRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN-GQEFPLVYRVVGW--- 548
            .||....|.|...:.:..:.:||..:||||.||..|.|::..:||::| ...||....|:||   
Zfish   454 DRLFDIIEDMTKSRPNYIFMLCWKYLTPLVSLVCFVCSMVEYQPLTFNRWYVFPDWAYVLGWLLA 518

  Fly   549 -----CVSGCIIGQLFYWAGYANFKQPKGSLKSR 577
                 .|.|..:|:|.         ..|||||.|
Zfish   519 LSSIVLVPGWALGRLC---------SEKGSLKQR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 177/491 (36%)
si:ch211-132b12.1NP_001076533.1 SLC6sbd-TauT-like 11..549 CDD:271387 197/554 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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