DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and si:ch211-132b12.3

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001076419.1 Gene:si:ch211-132b12.3 / 100002232 ZFINID:ZDB-GENE-050419-161 Length:577 Species:Danio rerio


Alignment Length:567 Identity:206/567 - (36%)
Similarity:322/567 - (56%) Gaps:54/567 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |..||...|||::.....||:|||||||:....||||.|||||||.:...|.|::.:|.::|||:
Zfish    11 RGFWGRKAEFLLAVAGNVVGVGNVWRFPYLCYRNGGGVFLIPYLVFVMTCGVPLFLLETVMGQFT 75

  Fly   116 SRGIVQVFD-FAPLMRGVGYA-QLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-D 177
            ..|.:..:. ..||.:||||| ||:.| ....|:..::|..|.|...||:|:|||:.|...|. |
Zfish    76 HEGGITCWHLLCPLAQGVGYAGQLIEL-YSCMYFTIILAWALFYLIFSFSSQLPWASCDNIWNTD 139

  Fly   178 GCVSASGGQPLQGQLSRNFSSSTQL--------YLQRIVLNETDSLEEGIGYPSGSLALMLGISW 234
            .||:.:.|       :..|:.:||:        :.:|.||:.:..:|| ||..:..:||.|.:.|
Zfish   140 NCVNLAAG-------NLTFNRTTQINSTSAATEFWERRVLSLSGGIEE-IGKINWEIALCLFVMW 196

  Fly   235 LTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYN 299
            :.....|.:||||:||..|..|.||||::.:||:|.||||||..||:::|.|:...|.:||||..
Zfish   197 IICYFCIWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPAHLADPQVWME 261

  Fly   300 AVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTK 364
            |.||||||.::|.|::|...|||::.:|.|||:..:..|::.||.::|..:|.:||.:||..|. 
Zfish   262 AGTQVFFSYSLCSGILIALGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFAVFSVLGFMAHVQGV- 325

  Fly   365 DIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV 429
            .:..|.::|||||||:||.|:|... |||::::.||.|:.:||:.|....:.|::|.:.|.|..|
Zfish   326 PVEEVAESGPGLAFIAYPQAVAMMP-FPQLWAVCFFIMIILLGLDSQFVAMECVVTSVTDLFPEV 389

  Fly   430 -------KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMD---FHGVTFVSLVSAIFELIAVGWI 484
                   :|:::::.|:.  |...||.:|.||.::..|.|   .:|..|:.|  ::||.:.:|||
Zfish   390 LRRAGRRELFVLLLCLTC--FFGQLIMVTEGGMYVFQLFDNYASNGACFLFL--SVFESLTIGWI 450

  Fly   485 YGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN-GQEFPLVYRVVGW 548
            :|.:::....:.|...:.:.::.:||..:||||.|...|||::...||:|| ...:|....|:||
Zfish   451 FGAEKMFDIIKDMTESRPNYWFMLCWKYLTPLVSLTSFVYSMVRYTPLTYNRWYVYPDWAHVLGW 515

  Fly   549 --------CVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSD 587
                    .|.|..:||:.         ..|||||.|..:...|.::
Zfish   516 LLALSSILLVPGWALGQMC---------TGKGSLKQRWGHLCSPDTN 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 185/494 (37%)
si:ch211-132b12.3NP_001076419.1 SLC6sbd-TauT-like 11..550 CDD:271387 205/562 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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