DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc45-1 and SUC9

DIOPT Version :9

Sequence 1:NP_001261618.1 Gene:Slc45-1 / 39055 FlyBaseID:FBgn0035968 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_196235.1 Gene:SUC9 / 830504 AraportID:AT5G06170 Length:491 Species:Arabidopsis thaliana


Alignment Length:547 Identity:116/547 - (21%)
Similarity:202/547 - (36%) Gaps:147/547 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EMFRLSAIAMAIEFAYAAETSFVSPILLQIGVDHKHMSMTWGLSPLIGFFMSPLLGSISDRCKLR 115
            :|..:::||..|:|.:|.:.|.::|.:..:||.||..|..|...|:.|..:.|.:|..|||||.|
plant    32 KMISVASIAAGIQFGWALQLSLLTPYVQLLGVPHKWSSFIWLCGPISGLLVQPTVGYFSDRCKSR 96

  Fly   116 WGRRRPIISILSFGIMCGLILVPYGKDLGLLLGDAGYTYAESALNFTSSSGGSVAALVSGEATTG 180
            :|||||.|:..:..:...:||:.:..|.|..:||.    .:.|:...                  
plant    97 FGRRRPFIATGALLVALAVILIGFAADFGHTMGDK----LDEAVKIR------------------ 139

  Fly   181 PSASDYKFAVILTILGMVLLDFDADTCQTPARTYLLDMCVPEEQP--KAMTMFALFAGFGGTIGY 243
                    ||...::|..:||...:|.|.|.|.:|.|:...:.:.  .|..:|:.|...|..:||
plant   140 --------AVGFFVVGFWILDVANNTLQGPCRAFLGDLAAGDAKKTRTANAIFSFFMAVGNVLGY 196

  Fly   244 AIGGVDWETTHIGSFMGGNIPTVFTLVTIIFAV----CYLITVTTFREIPLPLIEQDELLRPLSE 304
            |.|..    |::...    .|...|....|:..    |::|::|..  |.|.:|           
plant   197 AAGSY----TNLHKI----FPFTVTKACDIYCANLKSCFIISITLL--IVLTII----------- 240

  Fly   305 QAIKKELKKKNNTIYYIQETTQLELQMASDDPKRLEALQGSYQNGYSPAVEKQGKSQDLETQSDY 369
                        .::|:::                        ..:||..:...:.         
plant   241 ------------ALWYVED------------------------KQWSPNADSDNEK--------- 260

  Fly   370 DAPVSLKAYLKSIF----IMPYSMRMLALTNLFCWMGHVTYCLYFTDFVGEAVFHGDPTAAPNSE 430
                  ..:...||    :|...|.||.......|:....:.||.||::|..|:.||  :|.:.:
plant   261 ------TPFFGEIFGAFKVMKRPMWMLLAVTALNWIAWFPFLLYDTDWMGREVYGGD--SAGDDK 317

  Fly   431 AALNYEAGVRFGCWGMAIYAFSCSIYSLSVTKLMKWFGTKAVYISGMIYYGI------------- 482
            ....|..|::.|..|:.:.:....:.||.:..:.|..|.|.::.:..|...:             
plant   318 MKKLYNHGIQVGSLGLMLNSIVLGVMSLVIGVISKKIGAKRLWGAVNIILAVCLAMTVLVTKKAE 382

  Fly   483 ------GMLVLGLWPTKWGVLVFSTSAGILYGTIFTVPFILVARYHAKNCFSIKNGEIVPLKQAR 541
                  |.:.|.....:.|.|......||.....|::||.|.:              |:......
plant   383 EHRKIAGRMALPTNAIRDGALSLFAILGIPLAITFSIPFALAS--------------IISSSSGA 433

  Fly   542 GLGTDVAIISSMVFIAQLIVSLSVGPL 568
            |.|..:.:::..:.|.|:|||..|||:
plant   434 GQGLSLGVLNMAIVIPQMIVSFGVGPI 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc45-1NP_001261618.1 GPH_sucrose 49..568 CDD:273545 115/545 (21%)
MFS 444..>597 CDD:119392 28/144 (19%)
SUC9NP_196235.1 GPH_sucrose 28..491 CDD:273545 116/547 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 87 1.000 Domainoid score I2739
eggNOG 1 0.900 - - E1_KOG0637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1689
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1230185at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1050
orthoMCL 1 0.900 - - OOG6_100660
Panther 1 1.100 - - O PTHR19432
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X285
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.830

Return to query results.
Submit another query.