DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc45-1 and scrt1b

DIOPT Version :9

Sequence 1:NP_001261618.1 Gene:Slc45-1 / 39055 FlyBaseID:FBgn0035968 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001014369.1 Gene:scrt1b / 541533 ZFINID:ZDB-GENE-050327-72 Length:279 Species:Danio rerio


Alignment Length:57 Identity:17/57 - (29%)
Similarity:23/57 - (40%) Gaps:15/57 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 YGK---DLGLLLGDAGY--TYAESALNFTSSSGGSVAALVSGEATTGP----SASDY 186
            ||:   ||...:.|.||  .|...|:....|.||:..      .:.||    :.|||
Zfish    24 YGRSRTDLSFRIHDKGYISDYITPAIYDGESDGGTKV------PSPGPIYDSNHSDY 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc45-1NP_001261618.1 GPH_sucrose 49..568 CDD:273545 17/57 (30%)
MFS 444..>597 CDD:119392
scrt1bNP_001014369.1 zf-C2H2 130..152 CDD:278523
C2H2 Zn finger 132..152 CDD:275368
C2H2 Zn finger 163..180 CDD:275371
COG5048 187..>263 CDD:227381
zf-C2H2 187..209 CDD:278523
C2H2 Zn finger 189..209 CDD:275368
C2H2 Zn finger 217..237 CDD:275368
zf-C2H2 217..237 CDD:278523
zf-H2C2_2 229..253 CDD:290200
C2H2 Zn finger 245..261 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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