DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc45-1 and slc45a3

DIOPT Version :9

Sequence 1:NP_001261618.1 Gene:Slc45-1 / 39055 FlyBaseID:FBgn0035968 Length:599 Species:Drosophila melanogaster
Sequence 2:XP_002933049.1 Gene:slc45a3 / 100494269 XenbaseID:XB-GENE-492251 Length:547 Species:Xenopus tropicalis


Alignment Length:636 Identity:163/636 - (25%)
Similarity:261/636 - (41%) Gaps:177/636 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IKYMLKTRENHAREQDRDYSHVFRRKTRFEMFRLSAIAMAIEFAYAAETSFVSPILLQIGVDHKH 86
            ||.||     ||..|:    |:  ...|.::..::.:...:|...||..:||.|:||:.||:.|.
 Frog     3 IKKML-----HAGIQE----HL--STPRAQLLLINLLTCGLEVCLAAGVTFVPPLLLEAGVEGKF 56

  Fly    87 MSMTWGLSPLIGFFMSPLLGSISDRCKLRWGRRRPIISILSFGIMCGLILVPYGKDLGLLLGDAG 151
            |:|..|:.|:.|..:..|:||.||....|:|||||.|.::..|:|..||::||...|..|||  |
 Frog    57 MTMVLGIGPIAGLLIVHLIGSASDSWTSRYGRRRPFIWLMCVGVMLSLIIIPYSSQLASLLG--G 119

  Fly   152 YTYAESALNFTSSSGGSVAALVSGEATTGPSASDYKFAVILTILGMVLLDFDADTCQTPARTYLL 216
            :           ::|..||.||                     ||:.|||.....|.||....|.
 Frog   120 H-----------NAGVEVAFLV---------------------LGIGLLDSCGQVCFTPLEALLA 152

  Fly   217 DMCVPEEQP--KAMTMFALFAGFGGTIGYAIGGVDWETTHIGSFMGGNIPTVFTLVTIIFAVCYL 279
            |: .||.:.  ||.:::||..|.|..||..:..|||..:.:...:||....:|.|:.|||..|.:
 Frog   153 DL-FPEGESCRKAFSVYALTVGLGACIGTLLPAVDWSGSWLAKHLGGQEQVLFILLLIIFTGCVI 216

  Fly   280 ITVTTFREIPLPLIEQDELLRPLSEQAIKKELKKKNNTIYYIQETTQ---LELQMASDDPKRLEA 341
            .|                                     :::.|..:   :::::..|.|.|   
 Frog   217 AT-------------------------------------FFVSEELKPGIVQVEVPGDHPAR--- 241

  Fly   342 LQGSYQNGYSPAVEKQGKSQDLETQSDYDAPVSLKAY-----LKSIFIM-----------PYSMR 390
                             |...|:....:..|  |:|:     |:|:..:           |.::.
 Frog   242 -----------------KGPCLQACQLWTFP--LRAWQLVLTLRSVCALFPQLRTFCCKVPVTLW 287

  Fly   391 MLALTNLFCWMGHVTYCLYFTDFVGEAVFHGDPTAAPNSEAALNYEAGVRFGCWGMAIYAFSCSI 455
            .|.:..|..|||.:|:.|::||||||.::.|.|.|.|.:|..|.|:.|||.|..|:.:.:....|
 Frog   288 RLFVAQLCSWMGLMTFMLFYTDFVGEGLYKGVPVAKPGTEDRLRYDEGVRMGSMGLFLQSVISMI 352

  Fly   456 YSLSVTKLMKWFGTKAVYISGMIYYGIGMLVLGLWPTKWGVLVFSTSAGILYGTIFTVPFILVAR 520
            :|.|:..|:|.|||:::|::.:....:..:|:....:...|.:.:...|..:..:..||:.|...
 Frog   353 FSCSMDHLIKMFGTRSIYLASIACLPLATIVMCFSSSITIVTISAAMTGFTFSVLQIVPYTLTTF 417

  Fly   521 YH-----------------------AKNCF--SIKNGEIV----------------PLKQARGLG 544
            ||                       .|..|  ...||..:                |..|..|:.
 Frog   418 YHHNRQVYVPKYKDAGGYNNVTEKERKTGFHKDTPNGVSIFPSLGPECDTTVTITDPSAQKHGIC 482

  Fly   545 TDVAIISSMVFIAQLIVSLSVGPLVSWMDTTCAVLYASTFLSFLAAIAAMF 595
            .|:||:.|.|.::|::.||.:|.:|....|..|          .||:||.|
 Frog   483 LDMAILDSAVLLSQVVPSLVMGFIVQMTQTVTA----------YAAVAAAF 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc45-1NP_001261618.1 GPH_sucrose 49..568 CDD:273545 147/580 (25%)
MFS 444..>597 CDD:119392 42/193 (22%)
slc45a3XP_002933049.1 MFS_SLC45_SUC 22..506 CDD:340871 146/577 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1230185at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5076
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

Return to query results.
Submit another query.