Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_697486.2 | Gene: | gabrr2b / 569032 | ZFINID: | ZDB-GENE-041014-174 | Length: | 464 | Species: | Danio rerio |
Alignment Length: | 549 | Identity: | 165/549 - (30%) |
---|---|---|---|
Similarity: | 254/549 - (46%) | Gaps: | 137/549 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 MLGDVNISAILDSFSVS---YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 114
Fly 115 TDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRL 179
Fly 180 TITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLG-HRQR 243
Fly 244 ATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVL 308
Fly 309 TMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYM-----AKRIQMRKQRFMAI 368
Fly 369 QKIAEQKKQQLDGANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGH 433
Fly 434 HAHSHGHPHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVN 498
Fly 499 GGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGI 563
Fly 564 TPSDIDKYSRIVFPVCFVCFNLMYWIIYL 592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 68/183 (37%) |
Neur_chan_memb | 274..588 | CDD:397193 | 81/318 (25%) | ||
gabrr2b | XP_697486.2 | LIC | 55..463 | CDD:273305 | 160/535 (30%) |
Neur_chan_LBD | 56..261 | CDD:280998 | 75/205 (37%) | ||
Neur_chan_memb | 268..460 | CDD:280999 | 81/318 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.770 |