Protein Alignment Rdl and LOC562831

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: XP_021336587.1
• Gene: LOC562831 / 562831
• -ID: -
• Length: 465
• Species: Danio rerio
• Alignment Length: 534
• Identity: 158/534 - (29%)
• Similarity: 249/534 - (46%)
• Gaps: 136/534 - (25%)

  Fly    70 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGS 134
            |:|.:||.:...||.||:::.:.||.::||:.||:|...:.||.|||.||.:.   |.::||:..
Zfish    57 YNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLLFE---GNKSLSLDG 118

  Fly   135 EFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 199
            ..::.:||||||.|:.|:|:.|..|..|..||:..:|::..::|:|.|.:|.|:|..:|||:|.|
Zfish   119 RLVELLWVPDTFIVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTC 183

  Fly   200 HIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFV 264
            .:::||:||.:.|:.::|..|..||.....:.|.|:.|..|...|:|....||||.:|....:..
Zfish   184 TLQLESWGYNVNDVMFYWARGNESVSGLDTLRLAQYTVEDHYTSASEAVYETGNYPKLIFHFELK 248

  Fly   265 RSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKIS-YVK 328
            ||:.|::::.|:||.|:|::||||||:::::.|||:.:||||||||||||.....:||..: ::|
Zfish   249 RSILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIK 313

  Fly   329 SIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGANQQQANPNPNA 393
            :||||||.||..:|.:|:|||...:....                                :|:.
Zfish   314 AIDVYLGICFSFIFGALIEYAVAHFCTLH--------------------------------HPDC 346

  Fly   394 NVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQ-------TVSNR 451
            |                                :...:|||   |.|.|..::       |:|:.
Zfish   347 N--------------------------------NALMYGHH---HHHMHDCEEEMNGMLTTISDS 376

  Fly   452 PIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQSHGPGPGQGGG 516
                |.:::...|..                ||...|.|                 .|.|...|
Zfish   377 ----SRLKRRKDTAA----------------DPPKASDG-----------------EPEPVPSG- 403

  Fly   517 PPGGGGGGGGGGGPPEGGGDP--EAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPVC 579
                          ||...:|  ..|....||.    |.::.:|......|..||.|||:.||:.
Zfish   404 --------------PETPAEPVSRCAKSITLLR----KILRSVNCCHVKNPHYIDNYSRLTFPLS 450

  Fly   580 FVCFNLMYWIIYLH 593
            |:..||:||..||:
Zfish   451 FIIVNLLYWTYYLY 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	66/182 (36%)
		Neur_chan_memb	274..588	CDD:397193	80/323 (25%)
LOC562831	XP_021336587.1	Neur_chan_LBD	37..462	CDD:332142	156/530 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D226476at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920