Protein Alignment Rdl and LOC561083

DIOPT Version :10

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: XP_009295726.2
• Gene: LOC561083 / 561083
• -ID: -
• Length: 471
• Species: Danio rerio
• Alignment Length: 533
• Identity: 153/533 - (28%)
• Similarity: 244/533 - (45%)
• Gaps: 148/533 - (27%)

  Fly    70 YDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLS--V 132
            :|..:||.:||..:.||:.:.|.||.|:|||.||||:..|.|.:|.|.|||:   |....||  .
Zfish    75 HDFAMRPAFGGSAIPVGIDVQVESIDSISEVNMDFTMTLYLRHYWKDERLAF---PSSNNLSRTF 136

  Fly   133 GSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQ 197
            ....:|.||.||.|||:.|:|:.|..|..|..:||:..|:|..|:|:|:|:.|.|:...||:|.|
Zfish   137 DGRLVKKIWKPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSVRITVTSLCSMDFSRFPLDTQ 201

  Fly   198 LCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLG-HRQRATEINLTTGNYSRLACEI 261
            .|.:|:||:.|...|:..:|::|..|: .:.|:.|.||.:.. |......:..:||.|:||....
Zfish   202 NCSLELESYAYNENDLMLYWKNGNDSL-RTDEIALSQFFIEEFHVSHGLALYSSTGWYNRLYINF 265

  Fly   262 QFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISY 326
            ...|.:.::::|.|.|:.|:|::||||||::|.|.||||:||:||||||:|:::..:.::|::||
Zfish   266 ILRRHIFFFMLQTYFPTMLMVVLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSTSMPQVSY 330

  Fly   327 VKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGANQQQ----- 386
            ||::||||.|.|:.||.:::|||.|.|...:.:|:|.:.:.|.:....:....||....|
Zfish   331 VKAVDVYLWTSFLFVFLTVIEYAAVNYFTTKEEMKKLKQLKISEYDASQAMAFDGCFHDQDIELS 395

  Fly   387 ANP---NPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTV 448
            :.|   :.||:.                                                   .|
Zfish   396 SFPRLSDLNADT---------------------------------------------------CV 409

  Fly   449 SNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQSHGPGPGQ 513
            |:|....:::...:|||           :|          :..::..:||
Zfish   410 SSRNSTTADLPPVLGTR-----------LR----------RRRSIRQSVN--------------- 438

  Fly   514 GGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPV 578
                                          |:::                ....||.||||.||:
Zfish   439 ------------------------------HIIN----------------NSYKIDSYSRICFPL 457

  Fly   579 CFVCFNLMYWIIY 591
            .:..|||:||.||
Zfish   458 AYFLFNLIYWSIY 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	69/185 (37%)
		Cys-loop	185..199	CDD:349809	6/13 (46%)
		Neur_chan_memb	274..588	CDD:460753	73/321 (23%)
LOC561083	XP_009295726.2	None