Protein Alignment Rdl and GluClalpha

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: NP_001287408.1
• Gene: GluClalpha / 42350
• FlyBaseID: FBgn0024963
• Length: 463
• Species: Drosophila melanogaster
• Alignment Length: 551
• Identity: 161/551 - (29%)
• Similarity: 239/551 - (43%)
• Gaps: 150/551 - (27%)

  Fly    62 ILDSF--SVSYDKRVRPN----YGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLA 120
            :||..  :..||.|:||:    ..||.| |.|.::|.|||.:.:|.|::::...||:.|||.||.
  Fly    36 VLDQILGAGKYDARIRPSGINGTDGPAV-VRVNIFVRSISKIDDVTMEYSVQLTFREQWTDERLK 99

  Fly   121 YRKRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITAS 184
            :....| ::.|::..  ...:|:||.||.|||:.:||.....|.:||:..:||:..|||:::|.:
  Fly   100 FDDIQGRLKYLTLTE--ANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLA 162

  Fly   185 CPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINL 249
            |||||:.:|:|||:|.:.:.|:|:|..|:.:.|::| ..|.:...:.||:|.:............
  Fly   163 CPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG-DPVQVVKNLHLPRFTLEKFLTDYCNSKT 226

  Fly   250 TTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLM 314
            .||.||.|..::.|.|...|||||||||..::||:|||||||::.|.||||:|||||:|||.|..
  Fly   227 NTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQT 291

  Fly   315 SSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAK----RIQMRKQRFMAIQKIAEQK 375
            |..||:||.:||.|:|||:.|.|...||.:|||:|.|.|.::    :..|.|:..       ::|
  Fly   292 SGINASLPPVSYTKAIDVWTGVCLTFVFGALLEFALVNYASRSGSNKANMHKENM-------KKK 349

  Fly   376 KQQLDGANQQQA----NPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAH 436
            ::.|:.|:...|    :.:.||.                          ..|..:...|.|....
  Fly   350 RRDLEQASLDAASDLLDTDSNAT--------------------------FAMASQFARGGGQQKP 388

  Fly   437 SHGHPHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGR 501
            ...||
  Fly   389 LVRHP------------------------------------------------------------ 393

  Fly   502 GGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEA-----AVPAHLLHPGKVKKVKDINKLL 561
                                             |||.|     ....|:..|.:....|......
  Fly   394 ---------------------------------GDPLALEKRLQCEVHMQAPKRPNCCKTWLSKF 425

  Fly   562 GITPSDIDKYSRIVFPVCFVCFNLMYWIIYL 592
            ......||..|||.||:.|..|||:||..||
  Fly   426 PTRSKRIDVISRITFPLVFALFNLVYWSTYL 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	63/183 (34%)
		Neur_chan_memb	274..588	CDD:397193	79/326 (24%)
GluClalpha	NP_001287408.1	LIC	3..455	CDD:273305	159/548 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45447368
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	344	1.000	Inparanoid score	I2310
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D41384at33392
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X271
	6	6.000