Protein Alignment Rdl and CG12344

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: NP_001286298.1
• Gene: CG12344 / 36145
• FlyBaseID: FBgn0033558
• Length: 449
• Species: Drosophila melanogaster
• Alignment Length: 537
• Identity: 145/537 - (27%)
• Similarity: 230/537 - (42%)
• Gaps: 147/537 - (27%)

  Fly    69 SYDKRVR-PNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRK---RPGVET 129
            :|.|.:| |:..|.||.|..:::|:.|:|::...|||.:|.:..|.|.:.||....   ..|.:.
  Fly    43 NYVKEIRPPSKKGSPVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEEGDDY 107

  Fly   130 LSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF--IRVHHSGSITRSIRLTITASCPMNLQYF 192
            :::..|..:|.|.||.:|:|.|.:  .|||.:::|  :.::.:.::..:.|:....:|.|..|.:
  Fly   108 VTLLPEVFENFWQPDPYFLNSKIA--EIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLY 170

  Fly   193 PMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATE----INLTTGN 253
            |||.|:|.|.||||....:.::..|.|  |.|.::.|::|.|:. ||......|    :....||
  Fly   171 PMDIQVCPIYIESFSSNNQKVKLRWSD--SGVTLNPELKLLQYN-LGQPLELEESDGYMPEKVGN 232

  Fly   254 YSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTN 318
            :|||....:|.|.:|::|||.:.||.|:|::||.||||..:|.|.||.|.||.:||:.|:.  |.
  Fly   233 FSRLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMF--TG 295

  Fly   319 AALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGAN 383
            |.:|.::|||::|:::..|.:.|||:|.|:..|                         :.||...
  Fly   296 ADIPPVAYVKALDLWMAGCMLSVFAALAEFVVV-------------------------KVLDVQY 335

  Fly   384 QQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTV 448
            |.|.|..|..
  Fly   336 QYQVNRIPKV------------------------------------------------------- 345

  Fly   449 SNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQSHGPGPGQ 513
              .|:..||:::.    .|:.|               |..:||.:.:     |...|: ...|||
  Fly   346 --LPMRISNMEKG----QCATV---------------ASWEGGAVRS-----RKATQT-PTTPGQ 383

  Fly   514 GGGPPGGGGGGGGGGGPPEGGGDPEAAVPAH---LLHPGKVKKVKDINKLLGITPSDIDKYSRIV 575
            ....        |.||||:         ||.   ||..........:.|::.   .:|||.||.|
  Fly   384 TSLQ--------GNGGPPK---------PARRQSLLSVAWTDTDTGVEKIMW---REIDKVSRAV 428

  Fly   576 FPVCFVCFNLMYWIIYL 592
            ||:.|..|.|:||.|.|
  Fly   429 FPILFFVFVLLYWPILL 445

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	56/191 (29%)
		Neur_chan_memb	274..588	CDD:397193	74/316 (23%)
CG12344	NP_001286298.1	LIC	8..441	CDD:273305	141/531 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.910