Protein Alignment Rdl and glra1

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: XP_005173152.1
• Gene: glra1 / 30676
• ZFINID: ZDB-GENE-991117-1
• Length: 459
• Species: Danio rerio
• Alignment Length: 593
• Identity: 177/593 - (29%)
• Similarity: 258/593 - (43%)
• Gaps: 176/593 - (29%)

  Fly    23 IWLAI---NMALIAQETGHKRIHTVQAATGGGSMLGDVNISAILDSFSVSYDKRVRPNY------ 78
            :|..|   ::|...|....|....:..:.....::|.|:          .||.|:|||:
Zfish     8 LWETIVFFSLAASQQAAARKAASPMPPSEFLDKLMGKVS----------GYDARIRPNFKVVDPQ 62

  Fly    79 ---------GGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGS 134
                     .||||.|...:::.|..|::|..||:.::.:.||.|.||||||.:.|. ::|.:..
Zfish    63 GSKSDGTHKKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPD-DSLDLDP 126

  Fly   135 EFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 199
            ..:.:||.||.||.|||.:.||..||.|:.:|:..:|::..|||:|:..:|||:|:.||||.|.|
Zfish   127 SMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLYSIRITLVLACPMDLKNFPMDVQTC 191

  Fly   200 HIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQ-RATEINLTTGNYSRLACEIQF 263
            .:::|||||||.|:.:.| |...:|.::..:.||||.:...:. |....:..||.::.:......
Zfish   192 IMQLESFGYTMNDLIFEW-DEKGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHL 255

  Fly   264 VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVK 328
            .|.|||||||:||||.||||:||||||:|.:|.||||.||:||||||||..|.:.|:|||:||||
Zfish   256 ERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVK 320

  Fly   329 SIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGANQQQANPNPNA 393
            :||:::..|.:.||::|||||.|.:                 ||.|.|:.|
Zfish   321 AIDIWMAVCLLFVFSALLEYAAVNF-----------------IARQHKELL-------------- 354

  Fly   394 NVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTVSNRPIGFSNI 458
                                                                             
Zfish   355 ----------------------------------------------------------------- 354

  Fly   459 QQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQSHGPGPG-----QGGGPP 518
                               ||:..  :.|.|    |:....||....::|.||.     .|....
Zfish   355 -------------------RFQRR--RRHLK----EDEAGDGRFSFAAYGMGPACLQAKDGMAIK 394

  Fly   519 GGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPVCFVCF 583
            |..........|||                   |.|:::.||.......||..||:.||:.|:.|
Zfish   395 GNNNNAPTSTNPPE-------------------KTVEEMRKLFISRAKRIDTVSRVAFPLVFLIF 440

  Fly   584 NLMYWIIY 591
            |:.|||.|
Zfish   441 NIFYWITY 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	66/183 (36%)
		Neur_chan_memb	274..588	CDD:397193	83/318 (26%)
glra1	XP_005173152.1	LIC	7..448	CDD:273305	176/591 (30%)
		Neur_chan_LBD	38..259	CDD:280998	78/232 (34%)
		Neur_chan_memb	266..445	CDD:280999	83/318 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X271
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910