Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005173152.1 | Gene: | glra1 / 30676 | ZFINID: | ZDB-GENE-991117-1 | Length: | 459 | Species: | Danio rerio |
Alignment Length: | 593 | Identity: | 177/593 - (29%) |
---|---|---|---|
Similarity: | 258/593 - (43%) | Gaps: | 176/593 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 IWLAI---NMALIAQETGHKRIHTVQAATGGGSMLGDVNISAILDSFSVSYDKRVRPNY------ 78
Fly 79 ---------GGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGS 134
Fly 135 EFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLC 199
Fly 200 HIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQ-RATEINLTTGNYSRLACEIQF 263
Fly 264 VRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVK 328
Fly 329 SIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGANQQQANPNPNA 393
Fly 394 NVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTVSNRPIGFSNI 458
Fly 459 QQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQSHGPGPG-----QGGGPP 518
Fly 519 GGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPVCFVCF 583
Fly 584 NLMYWIIY 591 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 66/183 (36%) |
Neur_chan_memb | 274..588 | CDD:397193 | 83/318 (26%) | ||
glra1 | XP_005173152.1 | LIC | 7..448 | CDD:273305 | 176/591 (30%) |
Neur_chan_LBD | 38..259 | CDD:280998 | 78/232 (34%) | ||
Neur_chan_memb | 266..445 | CDD:280999 | 83/318 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X271 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |