Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038965308.1 | Gene: | Gabrr2 / 29695 | RGDID: | 61902 | Length: | 491 | Species: | Rattus norvegicus |
Alignment Length: | 581 | Identity: | 164/581 - (28%) |
---|---|---|---|
Similarity: | 256/581 - (44%) | Gaps: | 170/581 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 36 TGH-----------KRIHTVQAATGGGSMLGDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTM 89
Fly 90 YVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSY 154
Fly 155 FHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRD 219
Fly 220 GLSSVGMSSEVELPQFRVLG-HRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVI 283
Fly 284 ISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEY 348
Fly 349 ATVGYMAKRIQMRKQR-----FMAIQKIAEQKKQQLDGA-NQQQANPNPNANVGGPGGVGVGPGG 407
Fly 408 PGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGP 472
Fly 473 LFQEVRFKVH-----DPKAHSKGGTLENTVNGGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPE 532
Fly 533 GGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSD--IDKYSRIVFPVCFVCFNLMYWIIY 591 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 68/183 (37%) |
Neur_chan_memb | 274..588 | CDD:397193 | 77/326 (24%) | ||
Gabrr2 | XP_038965308.1 | LIC | 87..490 | CDD:273305 | 157/547 (29%) |
LGIC_ECD_GABAAR_rho | 102..287 | CDD:349806 | 69/185 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.770 |