Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001358656.1 | Gene: | GABRB2 / 2561 | HGNCID: | 4082 | Length: | 512 | Species: | Homo sapiens |
Alignment Length: | 590 | Identity: | 190/590 - (32%) |
---|---|---|---|
Similarity: | 286/590 - (48%) | Gaps: | 139/590 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 AATGGGSMLGDVNISAI---LDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLD 107
Fly 108 FYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGS 172
Fly 173 ITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRV 237
Fly 238 LGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVAL 302
Fly 303 GVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMA 367
Fly 368 IQKIAEQKKQQLDGANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHG 432
Fly 433 HHAHSHGHPHAPKQTVSNRPIGFSNIQQNVGTRGCSI---VGPLFQEVR-----FKVH--DPKAH 487
Fly 488 SKGGTLENTVNGGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDP--------------- 537
Fly 538 EAAVPAHLL-------HPGKVK-KVKDINKLLGITPSD------IDKYSRIVFPVCFVCFNLMYW 588
Fly 589 IIYLH 593 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 71/182 (39%) |
Neur_chan_memb | 274..588 | CDD:397193 | 97/352 (28%) | ||
GABRB2 | NP_001358656.1 | LIC | 9..510 | CDD:273305 | 189/586 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101786 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |