Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000801.1 | Gene: | GABRA5 / 2558 | HGNCID: | 4079 | Length: | 462 | Species: | Homo sapiens |
Alignment Length: | 545 | Identity: | 163/545 - (29%) |
---|---|---|---|
Similarity: | 237/545 - (43%) | Gaps: | 149/545 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 ILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPG 126
Fly 127 VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQY 191
Fly 192 FPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSE--VELPQFRVLGHRQRATEINLTTGNY 254
Fly 255 SRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNA 319
Fly 320 ALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGANQ 384
Fly 385 QQ-----ANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAP 444
Fly 445 KQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPK-AHSKGGTLENTVNGGRGGPQSHG 508
Fly 509 PGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSR 573
Fly 574 IVFPVCFVCFNLMYWIIYLHVSDVV 598 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 61/184 (33%) |
Neur_chan_memb | 274..588 | CDD:397193 | 83/319 (26%) | ||
GABRA5 | NP_000801.1 | LGIC_ECD_GABAAR_A5 | 58..256 | CDD:349839 | 67/199 (34%) |
LGIC_TM_GABAAR_alpha | 259..445 | CDD:349854 | 86/324 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 377..412 | 13/91 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |