Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000800.2 | Gene: | GABRA4 / 2557 | HGNCID: | 4078 | Length: | 554 | Species: | Homo sapiens |
Alignment Length: | 568 | Identity: | 182/568 - (32%) |
---|---|---|---|
Similarity: | 260/568 - (45%) | Gaps: | 105/568 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 58 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYR 122
Fly 123 KRPG-VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCP 186
Fly 187 MNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELP-------QFRVLGHRQRA 244
Fly 245 TEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLT 309
Fly 310 MTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQ 374
Fly 375 KKQQLDGANQQQANP-----NPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHH 434
Fly 435 AHS-----HGHPHAPKQTVSNRPIGFS--NIQQNV-GTRGCSIVGPLFQEVRFKVHDPKA----- 486
Fly 487 ---HSKGGTLE---NTVNG-GRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAH 544
Fly 545 LLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYL 592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 64/190 (34%) |
Neur_chan_memb | 274..588 | CDD:397193 | 95/338 (28%) | ||
GABRA4 | NP_000800.2 | Neur_chan_LBD | 13..541 | CDD:332142 | 180/565 (32%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 350..381 | 6/34 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 397..435 | 7/50 (14%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 452..471 | 4/20 (20%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 495..515 | 8/63 (13%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |