Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099050.1 | Gene: | GABRR3 / 200959 | HGNCID: | 17969 | Length: | 467 | Species: | Homo sapiens |
Alignment Length: | 526 | Identity: | 151/526 - (28%) |
---|---|---|---|
Similarity: | 242/526 - (46%) | Gaps: | 133/526 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 DKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSE 135
Fly 136 FIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCH 200
Fly 201 IEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINL----TTGNYSRLACEI 261
Fly 262 QFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISY 326
Fly 327 VKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLDGANQQQANPNP 391
Fly 392 NANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTVSNRPIGFS 456
Fly 457 NIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQSHGPGPGQGGGPPGGG 521
Fly 522 GGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPVCFVCFNLM 586
Fly 587 YWIIYL 592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 65/186 (35%) |
Neur_chan_memb | 274..588 | CDD:397193 | 75/313 (24%) | ||
GABRR3 | NP_001099050.1 | LIC | 55..466 | CDD:273305 | 150/523 (29%) |
Neur_chan_LBD | 59..267 | CDD:280998 | 72/199 (36%) | ||
Neur_chan_memb | 274..463 | CDD:280999 | 75/313 (24%) | ||
Interaction with SQSTM1. /evidence=ECO:0000250 | 347..448 | 30/225 (13%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D226476at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |