Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022438.1 | Gene: | lgc-35 / 189960 | WormBaseID: | WBGene00012915 | Length: | 515 | Species: | Caenorhabditis elegans |
Alignment Length: | 554 | Identity: | 146/554 - (26%) |
---|---|---|---|
Similarity: | 233/554 - (42%) | Gaps: | 152/554 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 SVSYDKRVRPN--YGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYR--KRPGV 127
Fly 128 ETLSVGSEFIKNIWVPDTFFVN-------EKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASC 185
Fly 186 PMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELPQFRVLGHRQRATEINLT 250
Fly 251 TGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMS 315
Fly 316 STNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRKQRFMAIQKIAEQKKQQLD 380
Fly 381 GANQQQANPNPNANVGGPGGVGVGP-----GGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHSHGH 440
Fly 441 PHAPKQTVSNRPIGFSNIQQNVGTRGCSIVGPLFQEVRFKVHDPKAHSKGGTLENTVNGGRGGPQ 505
Fly 506 SHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDK 570
Fly 571 Y---SRIVFPVCFVCFNLMYWIIYLHVSDVVADD 601 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 64/191 (34%) |
Neur_chan_memb | 274..588 | CDD:397193 | 67/321 (21%) | ||
lgc-35 | NP_001022438.1 | LIC | 83..491 | CDD:273305 | 142/540 (26%) |
Neur_chan_LBD | 84..283 | CDD:280998 | 70/204 (34%) | ||
Neur_chan_memb | 293..>370 | CDD:280999 | 35/79 (44%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |