Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001335538.1 | Gene: | lgc-45 / 189345 | WormBaseID: | WBGene00021146 | Length: | 1046 | Species: | Caenorhabditis elegans |
Alignment Length: | 362 | Identity: | 99/362 - (27%) |
---|---|---|---|
Similarity: | 175/362 - (48%) | Gaps: | 17/362 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 INMALIAQE-TGHKRIHTVQAATGGGSM-LGDVNISAILDSFSVSYDKRVRP-NYGGPPVEVGVT 88
Fly 89 MYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSE-FIKNIWVPDTFFVNEKQ 152
Fly 153 SYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFW 217
Fly 218 ----RDGLSSVGMSSEVELPQFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPS 278
Fly 279 GLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFA 343
Fly 344 SLLE-YATVGYMAKRIQMRKQRFMAIQKIAEQKKQQL 379 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 52/187 (28%) |
Neur_chan_memb | 274..588 | CDD:397193 | 32/107 (30%) | ||
lgc-45 | NP_001335538.1 | Neur_chan_LBD | 687..>969 | CDD:332142 | 85/287 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |