Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_508428.2 | Gene: | lgc-40 / 188854 | WormBaseID: | WBGene00020767 | Length: | 494 | Species: | Caenorhabditis elegans |
Alignment Length: | 558 | Identity: | 139/558 - (24%) |
---|---|---|---|
Similarity: | 234/558 - (41%) | Gaps: | 125/558 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 61 AILDSF--SVSYDKRVRP-NYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYR 122
Fly 123 KRPG--VETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASC 185
Fly 186 PMNLQYFPMDRQLCHIEIESFGYTMRDIRYFW--RDGLSSVGMSSEVELPQFRVLGHRQRATEIN 248
Fly 249 LTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTL 313
Fly 314 MSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQMRK---QRFMAIQKIAEQ- 374
Fly 375 --KKQQLDGANQQQANPNPNANVGGPGGVGVGPGGPGGPGGGVNVGVGMGMGPEHGHGHGHHAHS 437
Fly 438 HGHPHAP--KQTVSNRPIGFSNIQQNVGT------RGCSIVGPLFQEVRFKVH-----DPKAHSK 489
Fly 490 GGTLENTVNGGRGGPQSHGPGPGQGGGPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKV 554
Fly 555 KDINKLLGITPSDIDKYSRIVFPVCFVCFNLMYWIIYL 592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 51/186 (27%) |
Neur_chan_memb | 274..588 | CDD:397193 | 73/332 (22%) | ||
lgc-40 | NP_508428.2 | LIC | 9..490 | CDD:273305 | 137/555 (25%) |
Neur_chan_LBD | 44..242 | CDD:280998 | 57/201 (28%) | ||
Neur_chan_memb | 249..487 | CDD:280999 | 73/332 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |