Protein Alignment Rdl and avr-15

DIOPT Version :9

• Sequence 1: NP_001261617.1
• Gene: Rdl / 39054
• FlyBaseID: FBgn0004244
• Length: 608
• Species: Drosophila melanogaster
• Sequence 2: NP_001024076.1
• Gene: avr-15 / 179834
• WormBaseID: WBGene00000233
• Length: 657
• Species: Caenorhabditis elegans
• Alignment Length: 356
• Identity: 145/356 - (40%)
• Similarity: 205/356 - (57%)
• Gaps: 49/356 - (13%)

  Fly    70 YDKRVRPN------YGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAY----RKR 124
            ||.||||.      :|| ||.|.|.|.:.|||.:..|.|::::...||:.|.|.||::    ..:
 Worm   263 YDHRVRPPGEDGTIHGG-PVVVSVNMLLRSISKIDNVNMEYSVQLTFRESWVDKRLSFGVKGDAQ 326

  Fly   125 PGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNL 189
            |....|:.|.|    ||:||:||.||||:|.|:....|..||||..|:|..|:|:::..||||:|
 Worm   327 PDFLILTAGQE----IWMPDSFFQNEKQAYKHMIDKPNVLIRVHKDGTILYSVRISLVLSCPMHL 387

  Fly   190 QYFPMDRQLCHIEIESFGYTMRDIRYFWRD--------GLSSVGMSSEVELPQFRVLGHRQRATE 246
            ||:|||.|.|.|::.|:.||.:||.|.|::        ||||       .||.|::.........
 Worm   388 QYYPMDVQQCFIDLASYAYTTKDIEYVWKEETPVQLKAGLSS-------SLPSFQLTNTSTTYCT 445

  Fly   247 INLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMT 311
            ....||:||.|...||..|...|||:|:||||.::||:||||||::|.|.||||.|||||:||||
 Worm   446 SKTNTGSYSCLRTIIQLRRQFSYYLLQLYIPSCMLVIVSWVSFWIDRTAVPARVTLGVTTLLTMT 510

  Fly   312 TLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAK--------RIQMRKQRFMAI 368
            |..|..||.||.::|:|:|||::|.|...:|.:|||:|.|.|:|.        |.:..|.....:
 Worm   511 TQSSGINAKLPPVAYIKAIDVWIGACMTFIFCALLEFAWVTYIANKQDANKRARTEREKAELPFL 575

  Fly   369 Q----------KIAEQKKQQLD-GANQQQAN 388
            |          ::|||:::.:. ..|::|.|
 Worm   576 QNSHNDVWVPREVAEQEREVMTVRMNRRQTN 606

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdl	NP_001261617.1	LGIC_ECD_GABAR_RDL-like	83..266	CDD:349809	74/194 (38%)
		Neur_chan_memb	274..588	CDD:397193	57/134 (43%)
avr-15	NP_001024076.1	LIC	253..648	CDD:273305	145/356 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X271
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910