Sequence 1: | NP_001261617.1 | Gene: | Rdl / 39054 | FlyBaseID: | FBgn0004244 | Length: | 608 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001345970.1 | Gene: | Gabra4 / 14397 | MGIID: | 95616 | Length: | 578 | Species: | Mus musculus |
Alignment Length: | 662 | Identity: | 190/662 - (28%) |
---|---|---|---|
Similarity: | 274/662 - (41%) | Gaps: | 177/662 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 MAPLPRTPLLTIWLAINMALIAQETGHKRIH------TVQAATGGGS---MLGDVNISAILDSFS 67
Fly 68 VSYDKRVRPNYG--------------------------GPPVEVGVTMYVLSISSLSEVKMDFTL 106
Fly 107 DFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFIRVHHSG 171
Fly 172 SITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWRDGLSSVGMSSEVELP--- 233
Fly 234 ----QFRVLGHRQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRN 294
Fly 295 ATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFASLLEYATVGYMAKRIQ 359
Fly 360 MRKQRFMAIQKIAE-----------QKKQQLDGANQQQANPN----PNANVGGPGGVGVGPGGPG 409
Fly 410 GPGGGVNVGVGMGMGPEHGHGHGHHAHSHGHPHAPKQTVSNRPIGFSNIQ----QNVGTRGCSIV 470
Fly 471 GPLFQEVRFKVHDPKAH------------------SKGGTLENTVN--GGRGGPQSHGPGPGQGG 515
Fly 516 GPPGGGGGGGGGGGPPEGGGDPEAAVPAHLLHPGKVKKVKDINKLLGITPSDIDKYSRIVFPVCF 580
Fly 581 VCFNLMYWIIYL 592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rdl | NP_001261617.1 | LGIC_ECD_GABAR_RDL-like | 83..266 | CDD:349809 | 64/189 (34%) |
Neur_chan_memb | 274..588 | CDD:397193 | 95/352 (27%) | ||
Gabra4 | NP_001345970.1 | Neur_chan_LBD | 13..565 | CDD:332142 | 186/647 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |